bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1862_orf1 Length=151 Score E Sequences producing significant alignments: (Bits) Value 7719.ENSCINP00000011290 170 1e-41 > 7719.ENSCINP00000011290 Length=567 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 74/148 (50%), Positives = 112/148 (75%), Gaps = 0/148 (0%) Query 3 LIVADKNLANNIKKQLNINVLFSPSCYEVIRGIKLHLSSLITGLDDQDRHRMSMCLSHGL 62 L VAD L IK+++N+ ++SP+ E++RGI+ H+ SLI+GL ++D M++ L+H L Sbjct 88 LAVADAKLGQAIKEKMNLTCVYSPATQELMRGIRAHVDSLISGLPERDMTAMALGLAHSL 147 Query 63 NRLKLRFTPDKLDTMIIQAIGLLEELDKELNNFIMRIKEWYGWHFPELNKIIHDSLLYCK 122 +R KL+F+PDK+DTMI+QAI LL++LDKELNN+IMR +EWYGWHFPE+ K++ D L + K Sbjct 148 SRYKLKFSPDKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPEVGKVVTDHLAFAK 207 Query 123 IIQLIQFRSNAKYAPLETLLPHEICEEI 150 +I+ + R+NA+ L +LP EI +E+ Sbjct 208 VIKKMGVRTNAESCDLSDVLPEEIEKEV 235 Lambda K H 0.325 0.142 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22675567716 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40