bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2003_orf1
Length=131
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT3G47770.1                                                    85.5    5e-16


> 3702.AT3G47770.1
Length=900

 Score = 85.5 bits (210),  Expect = 5e-16, Method: Composition-based stats.
 Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 0/95 (0%)

Query  37   PTKALKGVSFCVPRGSCFAYIGINGSGKSTTFNILGSLMPQSAGSVFVGGFDILQQTRKA  96
            P  A+ G+S  VP G CF  +G NG+GK++  N++  L+  S+GS FV G DI +   K 
Sbjct  601  PKLAVCGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLVKPSSGSAFVQGLDICKDMDKV  660

Query  97   RAKLRYCPQTDALLPTLTGAEHVYLYGCLLGLRRH  131
               +  CPQ D L  TLTG EH+  YG L  L+ H
Sbjct  661  YISMGVCPQHDLLWETLTGKEHLLFYGRLKNLKGH  695



Lambda     K      H
   0.328    0.144    0.478 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22935578866


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40