bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_2004_orf1
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
5833.MAL3P1.9 116 2e-25
> 5833.MAL3P1.9
Length=1254
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 100/160 (62%), Gaps = 13/160 (8%)
Query 1 RDELTKQFKELYNVCIFVLKSFISSPHGGIKITLIQQTLKCLAHFLKWIPLGFVFET--- 57
R+E QF+E+YN+C+++L++ + + +LI+QTL CL++F KWIPL ++F+
Sbjct 194 RNEYASQFQEVYNLCLYILEANVYNKRST-NTSLIKQTLHCLSNFFKWIPLTYIFDKYKF 252
Query 58 -----ELLPLLLQYFYEDVSFRIDCLRCLTEVSSLQLNINELNLFSQQMTLLWAQLSDKA 112
+++ LL +F++D+S++I+C++C+ E+ L+++ + F LW +L K
Sbjct 253 NDNNIQIIDLLFDHFWDDISYKIECVKCIQEIVMLKIDEKNILYFDNVFINLWTKLVSKI 312
Query 113 AHTPKQSLQYNDPTSVPPQVRLFWETTFCQLELCLTAFLR 152
P N+ ++PP++++FWE F QL +C+T+FL+
Sbjct 313 KLLPNA----NEMKNIPPELKIFWEQYFLQLSICITSFLK 348
Lambda K H
0.327 0.140 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22586169780
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40