bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2055_orf1
Length=85
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFL1140w                                                       88.2    6e-17


> 5833.PFL1140w
Length=273

 Score = 88.2 bits (217),  Expect = 6e-17, Method: Composition-based stats.
 Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 8/85 (9%)

Query  1   DVDATREAHQHTHQQKAYDELSCSHTESHKKTSSDYLKAIVFGGLDGIVTIFAIVAGCVG  60
           DV  ++EAH   H           H E+H     D LK I+FG LDGI+TIFAIV+GCVG
Sbjct  17  DVVLSKEAHDFYHNLD-------KHGENHN-LDKDNLKTIIFGSLDGIITIFAIVSGCVG  68

Query  61  ANLHPSKVVITGIGNLLADAISMGF  85
           A + P++V+I GIGNL A+AISMGF
Sbjct  69  AKITPTQVIIIGIGNLFANAISMGF  93



Lambda     K      H
   0.319    0.133    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22515314785


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40