bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2180_orf1 Length=104 Score E Sequences producing significant alignments: (Bits) Value 9258.ENSOANP00000025964 172 2e-42 > 9258.ENSOANP00000025964 Length=244 Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 78/104 (75%), Positives = 92/104 (88%), Gaps = 0/104 (0%) Query 1 KEEALTIPNQTAITRDNVTLQIDGVLYVQIKDAYKASYGVENPIFAVTQLAQTTMRSELG 60 KE+A+ IPNQTAIT+DNV +QIDGVLYV+ DAY ASYGVE+P+FA+ QLAQTTMRSELG Sbjct 11 KEDAIVIPNQTAITKDNVIIQIDGVLYVKCVDAYDASYGVEDPVFAIMQLAQTTMRSELG 70 Query 61 KLTLDNTFLERNALNKTIVEAINTAAGPWGLTCLRYEIRDILLP 104 KL+LD+TFLER++LNK IV AIN+AA WG+ CLRYEIRDI LP Sbjct 71 KLSLDSTFLERDSLNKLIVNAINSAAKAWGIACLRYEIRDITLP 114 Lambda K H 0.317 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22759408663 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40