bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2214_orf2
Length=127
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0087                                                       209    2e-53


> 5833.PF11_0087
Length=366

 Score =  209 bits (531),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 101/126 (80%), Positives = 112/126 (88%), Gaps = 1/126 (0%)

Query  1    RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD  60
            RFALLIVDSAT LYRSE+ GRGELA+RQ HLCRFLR LQRIAD YGVAV+++NQVVAKVD
Sbjct  241  RFALLIVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVAKVD  300

Query  61   NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG  120
               S+F  +EK+PIGGNI+AHASQ RLYLRKG+GESRICKIYDSP LPEGEAVFAI EGG
Sbjct  301  -AMSMFGGHEKIPIGGNIIAHASQTRLYLRKGRGESRICKIYDSPVLPEGEAVFAITEGG  359

Query  121  IGDYED  126
            I DYE+
Sbjct  360  IADYEE  365



Lambda     K      H
   0.320    0.138    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22506847341


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40