bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2374_orf1 Length=114 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0215381 65.1 5e-10 > 44689.DDB_0215381 Length=1298 Score = 65.1 bits (157), Expect = 5e-10, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 0/102 (0%) Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLL 60 + F P+ +N+A F + AM ++TF NY+G P+ + L +N L L L L+L Sbjct 1191 DSPFAPNLLNSAVFLMSNAMQVATFAVNYKGHPFMQSLSENKPLLYALSFVWGLGLLLAT 1250 Query 61 QLLPFLNEILDLVLFHDADFLLQLQLLVAADLLGPWLVAATC 102 +++P LN +L+LV F D+ F L + + DL+G W + C Sbjct 1251 EIIPPLNSMLELVEFPDSTFRLYMVGAIILDLVGAWFIEKVC 1292 Lambda K H 0.328 0.142 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22778399648 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40