bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2390_orf1
Length=139
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFL1170w                                                        164    6e-40


> 5833.PFL1170w
Length=875

 Score =  164 bits (416),  Expect = 6e-40, Method: Composition-based stats.
 Identities = 83/139 (59%), Positives = 103/139 (74%), Gaps = 3/139 (2%)

Query  1    LDRNIDNKALYDTFSLFGNILSCKVGVDEANRSKGYGFVHYESEASARNAIEKVNGMLIG  60
            LD++IDNKAL+DTFS+FGNILSCKV  DE  +SK YGFVHYE E SA+ AIEKVNG+ +G
Sbjct  111  LDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLG  170

Query  61   GKTVYVGPFITRSERESAGVNRFTNVYLKNLPRCWSDPESLRPILEPFGEITSLVVKQDP  120
             K VYVGPFI +SER +    +FTN+Y+KN P   ++   LR +  P+GEITS++VK D 
Sbjct  171  SKNVYVGPFIKKSERATND-TKFTNLYVKNFPDSVTETH-LRQLFNPYGEITSMIVKMDN  228

Query  121  KGRPFAFCNYAE-HSAANA  138
            K R F F NYA+  SA NA
Sbjct  229  KNRKFCFINYADAESAKNA  247



Lambda     K      H
   0.318    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 23001752095


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40