bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2413_orf2
Length=127
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0108                                                       141    7e-33


> 5833.PF11_0108
Length=1329

 Score =  141 bits (355),  Expect = 7e-33, Method: Composition-based stats.
 Identities = 65/118 (55%), Positives = 84/118 (71%), Gaps = 0/118 (0%)

Query  9    RDVWLKLAEEAESSGFLTTAQAIIKATMKVGVEGINAKRVWSEDAEECLSRGSITVARAL  68
            RD W+K AEE E S F  T ++II+ TM +GVE +N KR++ +DA+ C+   SI  AR L
Sbjct  619  RDKWIKFAEECEQSKFTHTCESIIRNTMHIGVETLNKKRIYKQDAQNCIHNKSIHTARTL  678

Query  69   YTHALERLKTKKSLWLALADLETKHGTREALEKVLQKAVTCCPKADVLWLMAAKQQWL  126
            Y  AL+  KTKKSLWLALA+LE  HG RE +++VL +AV  CP + VLWLM AKQ+WL
Sbjct  679  YNEALKIFKTKKSLWLALANLELTHGKREDVDEVLHRAVQSCPHSSVLWLMLAKQKWL  736



Lambda     K      H
   0.317    0.128    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22506847341


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40