bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_2419_orf1
Length=112
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd3_3020 79.7 2e-14
> 5807.cgd3_3020
Length=357
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 0/73 (0%)
Query 40 QEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLDRR 99
Q IHPA++R+G++M +RKI G N R+ +L + +EDY PPY+SI++H+K+ LD
Sbjct 34 QSKIHPAILRLGMRMKDRKIVGTNMRSKCLLIAIGQMLEDYYCPPYKSIEKHLKMVLDVH 93
Query 100 INFITNCRPHNFA 112
I++IT+ R HN A
Sbjct 94 ISYITSQRQHNIA 106
Lambda K H
0.320 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22937329312
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40