bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2427_orf1 Length=128 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P7.12 230 1e-59 > 5833.MAL3P7.12 Length=433 Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 106/127 (83%), Positives = 122/127 (96%), Gaps = 0/127 (0%) Query 2 CHIVVMDEADKLLSPEFQPIVEKLIEFIPMQRQILMFSATFPVTVKDFKTKYLADAYEIN 61 CHI+VMDEADKLLSPEFQPIVE+L++F+P ++QILM+SATFPVTVK+F+ YL+DA+EIN Sbjct 203 CHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYSATFPVTVKEFRAIYLSDAHEIN 262 Query 62 LMDELTLKGVTQYYAFVEERQKVHCLNTLFAKLQINQGIIFCNSVTRVELLAKKITELGF 121 LMDELTLKG+TQYYAFV+ERQKVHCLNTLFAKLQINQ IIFCNS+TRVELLAKKITELG+ Sbjct 263 LMDELTLKGITQYYAFVKERQKVHCLNTLFAKLQINQAIIFCNSITRVELLAKKITELGY 322 Query 122 SCFYIHA 128 S FYIHA Sbjct 323 SSFYIHA 329 Lambda K H 0.328 0.140 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22424899233 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40