bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2453_orf2 Length=107 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_4430 92.8 3e-18 > 5807.cgd8_4430 Length=214 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/90 (54%), Positives = 67/90 (74%), Gaps = 1/90 (1%) Query 18 EAQQPAAQAFDFGERRKKKKEKKQEDQGEAAAAEGFIDGSGQIFVRGNVYTYEEMLSRIQ 77 E Q +DFGE+ KKKK+ K+ G + ++DGSGQ+FV+G +Y YEE+L R++ Sbjct 8 EGVQKMDMGYDFGEK-KKKKKSKEHKTGVSEVESSYVDGSGQLFVKGAIYPYEELLERVR 66 Query 78 DLIVKNNPDLAGSKRYTIKPPQVVRVGSKK 107 LI+++NPDL G+KRYT+KPPQVVRVGSKK Sbjct 67 RLILEHNPDLWGAKRYTLKPPQVVRVGSKK 96 Lambda K H 0.312 0.130 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22528463995 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40