bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_2466_orf1
Length=104
Score E
Sequences producing significant alignments: (Bits) Value
5691.Tb927.8.770 71.2 8e-12
> 5691.Tb927.8.770
Length=639
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query 1 IVELRGEPFLREENRRVAVVVNCGERFLLPLLPRPREGSTEQENGVFWRTSARPYQ-DLP 59
I ELRG+P LR NR +A+++ G RFLLPL+P RE E+GV+W+ RPY+ L
Sbjct 116 ITELRGDPRLRRGNRLIALIITEGRRFLLPLIPERREDDDSPESGVYWQVPTRPYEVQLS 175
Query 60 PS-FAELLVGTVQDPERASNIVQNLPSSSAEF 90
S A+L++GT+Q E +++V+ S ++
Sbjct 176 QSPRAQLVIGTLQHVEEVNDMVRRFAESGSQH 207
Lambda K H
0.318 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22759408663
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40