bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2487_orf1 Length=157 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_2180 207 6e-53 > 5807.cgd6_2180 Length=896 Score = 207 bits (528), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 101/159 (63%), Positives = 124/159 (77%), Gaps = 3/159 (1%) Query 2 TIDVILVQGVLYEGDKIVICGLHGPIITTIRTLLTPQPLKELRVKGEYISHSFVEASMGV 61 TIDVILV G+L EGD I++CGL PI+TTIR LLTPQP+ E+RVKGEYI H F++ASMGV Sbjct 544 TIDVILVSGILREGDTIIVCGLSAPIVTTIRALLTPQPMHEMRVKGEYIHHRFIKASMGV 603 Query 62 KIVAAGLDEAVAGTSLFVVEEGDSISDIEG---EVMKDMGAVLKSVDSTGSGVFVAASTL 118 KI A GLD+AVAGT L V + + +IE EVMKDMG + SVD TG+GV+V ASTL Sbjct 604 KICANGLDDAVAGTQLLVQSKNSTPEEIESLKEEVMKDMGDIFSSVDRTGNGVYVMASTL 663 Query 119 GSLEALLVYLEECKIPVFAVSIGTVQKKDIKRASVMREK 157 GSLEALLV+L+ IPV A++IGTV K D++RAS+M E+ Sbjct 664 GSLEALLVFLKSSNIPVVALNIGTVHKSDVRRASIMHER 702 Lambda K H 0.317 0.136 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 24996413160 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40