bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_2487_orf1
Length=157
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd6_2180 207 6e-53
> 5807.cgd6_2180
Length=896
Score = 207 bits (528), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/159 (63%), Positives = 124/159 (77%), Gaps = 3/159 (1%)
Query 2 TIDVILVQGVLYEGDKIVICGLHGPIITTIRTLLTPQPLKELRVKGEYISHSFVEASMGV 61
TIDVILV G+L EGD I++CGL PI+TTIR LLTPQP+ E+RVKGEYI H F++ASMGV
Sbjct 544 TIDVILVSGILREGDTIIVCGLSAPIVTTIRALLTPQPMHEMRVKGEYIHHRFIKASMGV 603
Query 62 KIVAAGLDEAVAGTSLFVVEEGDSISDIEG---EVMKDMGAVLKSVDSTGSGVFVAASTL 118
KI A GLD+AVAGT L V + + +IE EVMKDMG + SVD TG+GV+V ASTL
Sbjct 604 KICANGLDDAVAGTQLLVQSKNSTPEEIESLKEEVMKDMGDIFSSVDRTGNGVYVMASTL 663
Query 119 GSLEALLVYLEECKIPVFAVSIGTVQKKDIKRASVMREK 157
GSLEALLV+L+ IPV A++IGTV K D++RAS+M E+
Sbjct 664 GSLEALLVFLKSSNIPVVALNIGTVHKSDVRRASIMHER 702
Lambda K H
0.317 0.136 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 24996413160
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40