bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2609_orf1
Length=159
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5671.LinJ27.1900                                                    77.8    9e-14


> 5671.LinJ27.1900
Length=314

 Score = 77.8 bits (190),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 47/72 (65%), Gaps = 6/72 (8%)

Query  75   ITIANVGDSRGTLFHAGGGFSILSRDHKPTNPEELERIKKAGGFVSSSPASVPRVDGILA  134
            +  AN GDSR  L   G   + LS DHKPTNP E ERI KAGGFV +      RV+GIL+
Sbjct  145  LYCANTGDSRAVLCRNGEAIA-LSEDHKPTNPAERERIMKAGGFVQAG-----RVNGILS  198

Query  135  LSRAFGDGLFKD  146
            LSRAFGD  FKD
Sbjct  199  LSRAFGDYAFKD  210



Lambda     K      H
   0.315    0.135    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 26246233818


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40