bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2626_orf1 Length=149 Score E Sequences producing significant alignments: (Bits) Value 10116.ENSRNOP00000027537 177 7e-44 > 10116.ENSRNOP00000027537 Length=327 Score = 177 bits (450), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 83/149 (55%), Positives = 110/149 (73%), Gaps = 6/149 (4%) Query 1 LHVELNRPEKRNALNRDMFREIHSCFSEIADDKQCRAVVVSGSGKMFCGGLDYRDMMEMI 60 LHV+LNRPEKRNA+NR +RE+ CF +I+ D CRAVVVSG+GKMF G+D +M+M Sbjct 67 LHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGID---LMDMA 123 Query 61 SSVVNNDQLQRDDIAARAKFVRSLIILLQNSFNSIAKCHKPVIAAVHSGCVGAGLDMISA 120 S ++ Q DD+A A ++R LI Q +F I KC KPVIAA+H GC+G G+D+ISA Sbjct 124 SDIL---QPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISA 180 Query 121 ADIRYATEDAYFSIREVTIGMAADLGTLQ 149 DIRY T+DA+F ++EV +G+AAD+GTLQ Sbjct 181 CDIRYCTQDAFFQVKEVDVGLAADVGTLQ 209 Lambda K H 0.324 0.136 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40