bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2643_orf1
Length=121
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFE0340c                                                       98.6    5e-20


> 5833.PFE0340c
Length=759

 Score = 98.6 bits (244),  Expect = 5e-20, Method: Composition-based stats.
 Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 2/96 (2%)

Query  25   LLSAVFDPCTTTVGSSGALYGLLGGLVPFAVENWDFLHYPWCVLAIVIVVIATAQLNSMG  84
            LLSAV DPC  T+GSSG+LYGL+G L  + +E W  +  P CVL  + +V+    +  M 
Sbjct  511  LLSAVCDPCGVTIGSSGSLYGLIGALFAYYIEYWKTIPRPCCVLIFMFLVVMFGIIVGMF  570

Query  85   GFSAVDNFAHLGGCLGGLLFGFATIYTLRPIRRFSL  120
            G++  DN+AH+GGCLGG+LFGF+TI T+    + +L
Sbjct  571  GYT--DNYAHIGGCLGGVLFGFSTITTVSAADKCTL  604



Lambda     K      H
   0.327    0.146    0.473 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22998535989


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40