bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2651_orf1 Length=97 Score E Sequences producing significant alignments: (Bits) Value 5691.Tb11.02.4160 90.9 1e-17 > 5691.Tb11.02.4160 Length=257 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 2/90 (2%) Query 8 HDGGVHVNKISVNVVQTVSDVGRERRNLGGWLQSRRSIPLELTVPGPSYMAMAAPPPLHL 67 ++ + +K S + D+ RE + + WL ++ EL VP SY +M APPP H Sbjct 156 NNDDIECDKDSTTA--SSDDLARECQYIRSWLLAQGLNSSELRVPPVSYASMTAPPPAHA 213 Query 68 GGYHLCSVCLLPASYKCVRCRGALFCSIKC 97 GG+HLCSVCLLPA Y+CVRCR ALFCSI+C Sbjct 214 GGHHLCSVCLLPAGYRCVRCRTALFCSIEC 243 Lambda K H 0.323 0.139 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22472223870 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40