bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2694_orf3
Length=134
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT3G44600.1                                                    64.7    7e-10


> 3702.AT3G44600.1
Length=631

 Score = 64.7 bits (156),  Expect = 7e-10, Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query  41   TTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQKDPQCALLHQD  100
            TT  AI  SP+G+  ++   D  +R+F  R  KL RVY E+L   +  Q+     L   +
Sbjct  260  TTISAIEVSPDGKQFSITAPDRRIRVFWFRTGKLRRVYDESLVVAQDLQRS-DAPLYRLE  318

Query  101  ALDFEQRAALEKELSRSPLRLHQNLLFDSSSSFL  134
            A+DF +R A+EKEL ++      N +FD SS+FL
Sbjct  319  AIDFGRRMAVEKELEKTESAPQPNAVFDESSNFL  352



Lambda     K      H
   0.322    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22682284714


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40