bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2728_orf2 Length=153 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_2110 244 6e-64 > 5807.cgd7_2110 Length=261 Score = 244 bits (623), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 111/153 (72%), Positives = 134/153 (87%), Gaps = 0/153 (0%) Query 1 LAVEGIHTGQFIHCGKKAALSIGNVLPLGKVPEGSVVCSVEEKPGDRGALAKTSGSFATV 60 +AVEG+HTGQF++CGK A LS+GNVLP+G++PEG+++ S EEK GDRG LA+TSG++A + Sbjct 77 IAVEGLHTGQFVYCGKNATLSVGNVLPVGQIPEGTIISSCEEKAGDRGKLARTSGTYAII 136 Query 61 VGHSEETGKSRVRLPSGARKTLPSNSRCIIGLVAGGGRIDKPLLKAGTAYHKYKAKRNCW 120 VG SE+ K+R+RLPSGARKT+ S SR IIG+VA GGRIDKP+LKAG YHKYK KRNCW Sbjct 137 VGQSEDGTKTRIRLPSGARKTISSQSRAIIGIVAAGGRIDKPVLKAGNNYHKYKVKRNCW 196 Query 121 HKVRGVAMNPVEHPHGGGNHQHIGHPSTVSRHA 153 KVRGV+MNPV+HPHGGGNHQHIGHPSTVSR A Sbjct 197 PKVRGVSMNPVDHPHGGGNHQHIGHPSTVSRSA 229 Lambda K H 0.316 0.135 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23213563385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40