bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2748_orf1
Length=117
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5807.cgd1_1100                                                      97.4    1e-19


> 5807.cgd1_1100
Length=1103

 Score = 97.4 bits (241),  Expect = 1e-19, Method: Composition-based stats.
 Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 17/134 (12%)

Query  1    GKVAGGGLSYDGMLGLSLAS-----------------RGGIDTIISLFTPINIMNELVAP  43
            GKV  GG+SYDGM  +  A+                    +D + +L +P+N++ EL+ P
Sbjct  518  GKVGVGGISYDGMAAIKTAALSGNNESESSSEGFRSDNNLVDAVFALSSPMNVIKELIEP  577

Query  44   GGLLCYSFLHDYTQLTNNFEQNGSPWRHMLNSPLQFPFHVLLGFLFSFGGASAVLGYEED  103
            GGL+C   + DY  +T +FEQ GSP  H L +   +PF +++ FL   G  S V GY   
Sbjct  578  GGLICKPLVEDYYSITYSFEQYGSPLLHFLKTVAYYPFKLVVAFLLVIGNVSPVQGYSSI  637

Query  104  LHKAINSHKNNWRM  117
              +A+  H+ NW M
Sbjct  638  KKQALEMHQKNWDM  651



Lambda     K      H
   0.322    0.141    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22540005152


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40