bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2968_orf1
Length=133
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  10090.ENSMUSP00000019995                                             105    4e-22


> 10090.ENSMUSP00000019995
Length=730

 Score =  105 bits (262),  Expect = 4e-22, Method: Composition-based stats.
 Identities = 54/134 (40%), Positives = 79/134 (58%), Gaps = 4/134 (2%)

Query  1    FPSEPTWMVSVDVTDDEKFIVASISRSCEPTNKLWIAALPDGTVPSTAFSKLQWVKVADD  60
            FP EP WM   +++DD ++++ SI   C+P N+LW   L     P+     L+WVK+ D+
Sbjct  228  FPDEPKWMGGAELSDDGRYVLLSIWEGCDPVNRLWYCDLQQE--PNGITGILKWVKLIDN  285

Query  61   FEAGFDYVANDGTIFLLKTNRDAPKNKIVKVDVAKPDAPMVDV-VPE-AGAVLEDVMVVA  118
            FE  +DYV N+GT+F  KTNR++P  +++ +D   PD     V VPE    VLE V  V 
Sbjct  286  FEGEYDYVTNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWKVLVPEHEKDVLEWVACVR  345

Query  119  GDKMVLHYNEDVKS  132
             + +VL Y  DVK+
Sbjct  346  SNFLVLCYLHDVKN  359



Lambda     K      H
   0.316    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22766716098


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40