bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_3006_orf1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
9031.ENSGALP00000008454 114 6e-25
> 9031.ENSGALP00000008454
Length=571
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 0/94 (0%)
Query 2 QEWCGFGWDSQLLETGFLGAWISPFWSSSRFPRSWPVPFVCIWGCRWLLLRLYLGTGLSL 61
Q W FGW+SQLLETGFLG ++ P W+ SR PRS P + IWG RWL+ R+ LG GL
Sbjct 172 QIWYSFGWESQLLETGFLGMFLCPLWTLSRLPRSTPPSSIVIWGFRWLIFRIMLGAGLIK 231
Query 62 LRGDSAWRDLSALSYYYQTQPLPSPLAWVLHHQP 95
+R D WRDL+ ++Y+Y+TQP+P+P+A+ +H P
Sbjct 232 IREDHCWRDLTCMNYHYETQPVPNPIAYFMHRSP 265
Lambda K H
0.328 0.141 0.535
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22752691665
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40