bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_3010_orf1 Length=134 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd4_1470 156 2e-37 > 5807.cgd4_1470 Length=920 Score = 156 bits (394), Expect = 2e-37, Method: Composition-based stats. Identities = 71/135 (52%), Positives = 94/135 (69%), Gaps = 1/135 (0%) Query 1 DPKTGQQVHRSVFVVYHQGSSQSLLHEKIKKVAEAFNGQCYEWPQTFREAEDRLQALSDV 60 DPKT + V + VFV+Y QG++ S +++KI ++ +AFN Y WP ++ A R+ L+ + Sbjct 249 DPKTSKDVQKVVFVIYFQGATTSAVYDKISRICDAFNVSIYPWPSSYEHAIQRISELNTL 308 Query 61 IKDKEKALAAYEYYFLGEISTLLE-VPREGGSSLIEEWRMFCSKEKAIYAALNCFEGHDM 119 I+DKEKAL AYE Y EI TLL+ V G+SLIEEWR+FC KEK+IYA LN FEG D+ Sbjct 309 IQDKEKALQAYEQYITLEIETLLQPVNSNNGNSLIEEWRLFCIKEKSIYATLNLFEGSDI 368 Query 120 TLRCTCWIPKKNEEK 134 TLR CW P + EEK Sbjct 369 TLRADCWYPTEEEEK 383 Lambda K H 0.318 0.133 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22682284714 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40