bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_3147_orf1
Length=120
Score E
Sequences producing significant alignments: (Bits) Value
5270.UM02461.1 82.4 3e-15
> 5270.UM02461.1
Length=508
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 65/121 (53%), Gaps = 34/121 (28%)
Query 1 APSSCV--LAQGIEGLFKRNKVEYIKGAGRLADPHTVEVQPIGGGSTEKLKTKNIILATG 58
A SS V L +GIEGLFK+NKV+Y+KGAG + P T++V GG TE ++ KNII+ATG
Sbjct 127 AKSSAVTGLTKGIEGLFKKNKVDYLKGAGSFSSPTTIKVALNDGGETE-IEAKNIIIATG 185
Query 59 SEAAPLVGGALEAVTCSRLSTKHLSSRTSRFQRLVFFCLCQVDEQQIVSSTGALALSSVP 118
SE P G ++DE+QIVSSTGAL L VP
Sbjct 186 SEVTPFPG-------------------------------IEIDEKQIVSSTGALELQKVP 214
Query 119 R 119
Sbjct 215 E 215
Lambda K H
0.317 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23080484097
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40