bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_3212_orf2
Length=104
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5807.cgd1_990                                                        106    2e-22


> 5807.cgd1_990
Length=1147

 Score =  106 bits (265),  Expect = 2e-22, Method: Composition-based stats.
 Identities = 46/92 (50%), Positives = 69/92 (75%), Gaps = 0/92 (0%)

Query  11    FVLDPMELKHLTLLALSLIVGYYCVWAVTPALHTPLMSVTNALSGVIVIGCMLEYGTALI  70
               +  ++++++    +S ++GYYCVW V P LHTPLMSVTNALSGVI+IG M++YG   +
Sbjct  1054  LTMTTIQIQNIFSFIISTMLGYYCVWDVDPKLHTPLMSVTNALSGVIIIGSMMQYGNQTV  1113

Query  71    SGFTLLAIIGTFLASVNIAGGFFVTHRMLKMF  102
             +  TL+++  TFLAS+N  GGF+VT++ML +F
Sbjct  1114  TYTTLMSMFSTFLASINTFGGFYVTNKMLTLF  1145



Lambda     K      H
   0.329    0.142    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22759408663


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40