bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_3305_orf2
Length=176
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0310                                                      85.9    6e-16


> 5833.PF11_0310
Length=609

 Score = 85.9 bits (211),  Expect = 6e-16, Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 0/144 (0%)

Query  30   FIKQFTSPYAICIVVYSIIKAIMYAFFTTAAENLLGKEVNDFMGAALPFSLFPCIVIGKV  89
             IK FT  + +C+ +Y  + AI   F+ +  EN+L K+ ND +G  LPFS  PC+++G +
Sbjct  414  LIKIFTCAHFLCLWIYGPLNAIYNTFYFSVVENILSKDKNDILGYILPFSFIPCVLLGNL  473

Query  90   VDMVGIMPILFFLNTCITLAYGFSMIPALPTAYFSALLYICYVSFYSSQSYCFVSDTFSS  149
             D  G+M +  +        Y FS I +    + S +    Y +  + Q + F+S TFSS
Sbjct  474  SDKFGVMLMFTYELIFAFSMYAFSYIKSNWAQWISVISNALYSACANGQLWTFISFTFSS  533

Query  150  SHFGKIVGTIHLLAGFLSLLKIPM  173
             +   ++G ++L+ G +S +++ +
Sbjct  534  KYHSTLIGFLNLVCGVVSFVRLSL  557



Lambda     K      H
   0.328    0.140    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 35336795289


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40