bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_3329_orf2
Length=85
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0172                                                      90.5    1e-17


> 5833.PF11_0172
Length=455

 Score = 90.5 bits (223),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 0/79 (0%)

Query  1    IEATAEIQLLPLLVLTASICPPGLEGSVYAMMMSVRNTGAMASRGISAILTYMAGITSSN  60
            IEA  EIQLLPL +LTA+IC PGLE SV+A ++SV+N G++  +G S+ +TY+  I S N
Sbjct  354  IEAITEIQLLPLFILTANICQPGLEASVFATILSVKNLGSLTKKGTSSFITYLMKIDSYN  413

Query  61   FTHLTGYIMLCGASLLIPL  79
            F +L+ YI+ CG  LL  L
Sbjct  414  FDNLSLYILTCGFFLLFSL  432



Lambda     K      H
   0.325    0.137    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22515314785


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40