bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_3381_orf1 Length=130 Score E Sequences producing significant alignments: (Bits) Value 4952.YALI0B18348g 131 6e-30 > 4952.YALI0B18348g Length=422 Score = 131 bits (329), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 2/123 (1%) Query 1 FKVLSVRTALSIQAHPNKALAEKLHHDDPFHYPDANHKPELAIALTEFEAFCGFKPHAEI 60 FKVLS+R ALSIQAHP+K L +LH DP HYPDANHKPE+AIALT+FE FCGF+P +EI Sbjct 95 FKVLSIRKALSIQAHPDKELGAQLHASDPAHYPDANHKPEMAIALTDFEGFCGFRPLSEI 154 Query 61 EFLLNSVPGFKNIIGQDLVAKYQS--AGDKKETLKELFSALMTAPEELVKNNLSSLKTRR 118 E L +VP F+ ++G + ++ S + D K+ L+ LF LM + ++LV + + L R Sbjct 155 EHFLETVPEFRELVGDESAKQFASERSADPKKALQALFGRLMRSSDDLVASKAADLVKRA 214 Query 119 TTQ 121 ++ Sbjct 215 ESE 217 Lambda K H 0.315 0.131 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23020010250 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40