bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_3400_orf2
Length=206
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF13_0233                                                       300    2e-80


> 5833.PF13_0233
Length=818

 Score =  300 bits (767),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 139/206 (67%), Positives = 167/206 (81%), Gaps = 0/206 (0%)

Query  1    DPEAVMRELTMKVTFAGGQRVESRWRQEDGDMLKSSLAKAMYDKLFLWIISELNKSIKPP  60
            DPE + RE+ +KVT AGG ++E RW + D ++LKSSL KAMY+KLFLWII  LN  I+P 
Sbjct  399  DPELIKREILIKVTVAGGTKIEGRWNKNDAEVLKSSLCKAMYEKLFLWIIRHLNSRIEPE  458

Query  61   EGFKNFLGMLDIFGFEVFKNNSLEQFFINVTNEMLQKNFVDIVFTREAKLYKEEDVSTAE  120
             GFK F+GMLDIFGFEVFKNNSLEQ FIN+TNEMLQKNFVDIVF RE+KLYK+E +STAE
Sbjct  459  GGFKTFMGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTAE  518

Query  121  LVYTSNTDVITLLTDKKNSILSSLEDQCLAPGGSDEKFVAACKSAFKNSSKFKPAKVSPN  180
            L YTSN +VI +L +K  S+LS LEDQCLAPGG+DEKFV++C +  K ++KF PAKV+ N
Sbjct  519  LKYTSNKEVINVLCEKGKSVLSYLEDQCLAPGGTDEKFVSSCATNLKENNKFTPAKVASN  578

Query  181  INFLVSHTIGDIQYSAEGFLFKNKDV  206
             NF++ HTIG IQY AE FL KNKDV
Sbjct  579  KNFIIQHTIGPIQYCAESFLLKNKDV  604



Lambda     K      H
   0.317    0.133    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 51449491716


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40