bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_0267_orf1
Length=174
Score E
Sequences producing significant alignments: (Bits) Value
CE02732 40.4 0.002
At5g01430 37.0 0.018
At3g49420 37.0 0.018
Hs7705636 32.7 0.38
SPCC4B3.02c 31.2 1.2
Hs17488855 28.9 5.7
> CE02732
Length=112
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 0/75 (0%)
Query 87 KNAKVFCAETAKVESIVALHPGVLLIALGYSLIGLPLQLYGLLRLFASFLPQVLGAVRLS 146
+ VF E K++ + G+L++ GY L G+ + +G + LF FLP ++ +R
Sbjct 26 QRTLVFFFEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSI 85
Query 147 PVGCWILQLPGFKQC 161
P I LPG +Q
Sbjct 86 PGISTITYLPGIRQV 100
> At5g01430
Length=140
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 0/70 (0%)
Query 87 KNAKVFCAETAKVESIVALHPGVLLIALGYSLIGLPLQLYGLLRLFASFLPQVLGAVRLS 146
K+ F + + ++ G + +G+ ++G+ L+ YG LF+ F P + +
Sbjct 55 KSTMQFFMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKI 114
Query 147 PVGCWILQLP 156
PV WI+Q P
Sbjct 115 PVLGWIIQQP 124
> At3g49420
Length=140
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 0/70 (0%)
Query 87 KNAKVFCAETAKVESIVALHPGVLLIALGYSLIGLPLQLYGLLRLFASFLPQVLGAVRLS 146
K+ F + + ++ G + +G+ ++G+ L+ YG LF+ F P + +
Sbjct 55 KSTMQFFMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKI 114
Query 147 PVGCWILQLP 156
PV WI+Q P
Sbjct 115 PVLGWIIQQP 124
> Hs7705636
Length=138
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 0/81 (0%)
Query 92 FCAETAKVESIVALHPGVLLIALGYSLIGLPLQLYGLLRLFASFLPQVLGAVRLSPVGCW 151
F + K+++ GV ++ +G+ LIG+ ++YG LF F P V+G +R PV
Sbjct 58 FFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGS 117
Query 152 ILQLPGFKQCTKWVLDGDKQL 172
+L LPG + V + + +
Sbjct 118 LLNLPGIRSFVDKVGESNNMV 138
> SPCC4B3.02c
Length=129
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query 73 FGFYVGDRLGAWRQKNAKVFCAETAKVESIVALHPGVLLIALGYSLIGLPLQLYGLLRLF 132
FGF+ + A K+ F + + SI + G+LL + +IG ++ G LF
Sbjct 43 FGFF----MIAGFSKSVSFFLRKDRMLGSI-SFFSGLLLTLFHFPIIGFFVECLGFFNLF 97
Query 133 ASFLPQVLGAVRLSP-VGCWILQLPGFKQ 160
F P ++ +R P +G +I +L ++Q
Sbjct 98 KVFYPLIISFLRTVPYIGPYIDRLTSYQQ 126
> Hs17488855
Length=126
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 0/50 (0%)
Query 92 FCAETAKVESIVALHPGVLLIALGYSLIGLPLQLYGLLRLFASFLPQVLG 141
F + K++ L GV+++ L + L+G+ L+ YG LF F P G
Sbjct 52 FFFQRHKLKGTSFLLGGVVIVLLRWPLLGMFLETYGFFSLFKGFFPVAFG 101
Lambda K H
0.324 0.141 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2634976318
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40