bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Emax_0399_orf1
Length=137
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  At1g56450                                                           50.8    7e-07
  7296763                                                             50.4    9e-07
  Hs4506199                                                           49.7    2e-06
  CE20761                                                             40.8    9e-04


> At1g56450
Length=246

 Score = 50.8 bits (120),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 30/94 (31%)

Query  43   LTPKAIASYTARTLYNKRCRFNPYWLSVVVAGYMGPPTGIHQQQQQQQEQQQQEQQQQQG  102
            L PK I +Y  R +YN+R +FNP W ++V+ G                            
Sbjct  106  LGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGG----------------------------  137

Query  103  MAKAGNEMYLGVADLLGTFFEEQVIATGLGRYFA  136
              K G   YLG+  ++G  FE+  +ATG G + A
Sbjct  138  -VKNGKS-YLGMVSMIGVSFEDDHVATGFGNHLA  169


>
Length=268

 Score = 50.4 bits (119),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 29/95 (30%)

Query  43   LTPKAIASYTARTLYNKRCRFNPYWLSVVVAGYMGPPTGIHQQQQQQQEQQQQEQQQQQG  102
            + PK++AS+  R LYN+R R NP ++ VVV G     T                      
Sbjct  132  MKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTP---------------------  170

Query  103  MAKAGNEMYLGVADLLGTFFEEQVIATGLGRYFAI  137
                    YL   DL G  +E+ V+ATG  R+ A+
Sbjct  171  --------YLANVDLRGRSYEDYVVATGFARHLAV  197


> Hs4506199
Length=264

 Score = 49.7 bits (117),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 30/93 (32%)

Query  44   TPKAIASYTARTLYNKRCRFNPYWLSVVVAGYMGPPTGIHQQQQQQQEQQQQEQQQQQGM  103
            +P+AI S+  R +Y++R + NP W ++V+ GY                            
Sbjct  129  SPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGY----------------------------  160

Query  104  AKAGNEMYLGVADLLGTFFEEQVIATGLGRYFA  136
              A  E +LG  D+LG  +E   +ATG G Y A
Sbjct  161  --ADGESFLGYVDMLGVAYEAPSLATGYGAYLA  191


> CE20761
Length=236

 Score = 40.8 bits (94),  Expect = 9e-04, Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 0/37 (0%)

Query  38   RTEALLTPKAIASYTARTLYNKRCRFNPYWLSVVVAG  74
            R +  + PKA+  Y    LY KRC+ NP W ++VVAG
Sbjct  85   RFDQDIGPKALHGYLTSLLYAKRCKMNPVWNTLVVAG  121



Lambda     K      H
   0.315    0.128    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1461889840


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40