bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_0724_orf2 Length=165 Score E Sequences producing significant alignments: (Bits) Value At5g17900 102 4e-22 At4g08580 102 4e-22 Hs5174553 99.0 4e-21 7292185 92.0 5e-19 SPAC1782.03 89.0 4e-18 CE10372 72.0 5e-13 YER008c 32.0 0.59 > At5g17900 Length=435 Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 94/146 (64%), Gaps = 20/146 (13%) Query 33 QQNMLEGEEEMPD--DTDGLDPAQEYEDWKLRELERIRRDKEQLVAREKFL---EAVERR 87 ++N+L E + D D L+ A+EYE WK RE+ RI+R+++ ARE L E +E+ Sbjct 237 RKNILLEEANIGDVETDDELNEAEEYEVWKTREIGRIKRERD---AREAMLREREEIEKL 293 Query 88 RQMTEEERREGDKELDK---MQPKREIKHKYQFMQKYYHRGAFFQ-----DLARSGEEPI 139 R MTE+ERR+ +++ K QPK+ K+ FMQKYYH+GAFFQ + +G + I Sbjct 294 RNMTEQERRDWERKNPKPLSAQPKK----KWNFMQKYYHKGAFFQADPDDEAGSAGTDGI 349 Query 140 YLRDFNAPVGEDAVDKKALPKILQLR 165 + RDF+AP GED +DK LPK++Q++ Sbjct 350 FQRDFSAPTGEDRLDKSILPKVMQVK 375 > At4g08580 Length=435 Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 94/146 (64%), Gaps = 20/146 (13%) Query 33 QQNMLEGEEEMPD--DTDGLDPAQEYEDWKLRELERIRRDKEQLVAREKFL---EAVERR 87 ++N+L E + D D L+ A+EYE WK RE+ RI+R+++ ARE L E +E+ Sbjct 237 RKNILLEEANIGDVETDDELNEAEEYEVWKTREIGRIKRERD---AREAMLREREEIEKL 293 Query 88 RQMTEEERREGDKELDK---MQPKREIKHKYQFMQKYYHRGAFFQ-----DLARSGEEPI 139 R MTE+ERR+ +++ K QPK+ K+ FMQKYYH+GAFFQ + +G + I Sbjct 294 RNMTEQERRDWERKNPKPSSAQPKK----KWNFMQKYYHKGAFFQADPDDEAGSAGTDGI 349 Query 140 YLRDFNAPVGEDAVDKKALPKILQLR 165 + RDF+AP GED +DK LPK++Q++ Sbjct 350 FQRDFSAPTGEDRLDKSILPKVMQVK 375 > Hs5174553 Length=439 Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 4/107 (3%) Query 59 WKLRELERIRRDKEQLVAREKFLEAVERRRQMTEEERREGDKELDKMQPKREIKHKYQFM 118 WK+REL+RI+RD+E A EK +ER R +TEEERR + K+ + +K KY+F+ Sbjct 279 WKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFL 338 Query 119 QKYYHRGAFFQDLARSGEEPIYLRDFNAPVGEDAVDKKALPKILQLR 165 QKYYHRGAFF D +E +Y RDF+AP ED +K LPK++Q++ Sbjct 339 QKYYHRGAFFMD----EDEEVYKRDFSAPTLEDHFNKTILPKVMQVK 381 > 7292185 Length=478 Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 55/121 (45%), Positives = 76/121 (62%), Gaps = 8/121 (6%) Query 47 TDGLDPAQEYEDWKLRELERIRRDKEQL--VAREKFLEAVERRRQMTEEERREGDKELDK 104 TD + EYE WKLREL+R++RD+E+ V REK ++R R MTEEERR+ ++ K Sbjct 305 TDDENDEVEYEAWKLRELKRMKRDREERDNVEREKL--DIDRMRNMTEEERRQELRQNPK 362 Query 105 MQPKREIKHKYQFMQKYYHRGAFFQDLARSGEEPIYLRDFNAPVGEDAVDKKALPKILQL 164 + + K KY+F+QKYYHRGAF+ D E + RDF ED DK LPK++Q+ Sbjct 363 VVTNKATKGKYKFLQKYYHRGAFYLD----EENDVLKRDFAQATLEDHFDKTILPKVMQV 418 Query 165 R 165 + Sbjct 419 K 419 > SPAC1782.03 Length=355 Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 5/121 (4%) Query 45 DDTDGLDPAQEYEDWKLRELERIRRDKEQLVAREKFLEAVERRRQMTEEERREGDKELDK 104 DDTDG+DP EYE WKLR L R +RDKE+ + E+ A+E RR M EER D + + Sbjct 183 DDTDGIDPQSEYELWKLRHLLRKKRDKEKSLELEREKMAIEERRLMNSEEREAQDLKDAE 242 Query 105 MQPKREIKHKYQFMQKYYHRGAFFQDLARSGEEPIYLRDFNAPVGEDAVDKKALPKILQL 164 + + K QF+QKYYH+GAF+Q+ E+ + RD++ + ++K LPK +Q+ Sbjct 243 ASRRGKKKSSMQFLQKYYHKGAFYQN-----EDIVSKRDYSEATEGEVLNKDLLPKPMQI 297 Query 165 R 165 R Sbjct 298 R 298 > CE10372 Length=466 Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query 56 YEDWKLRELERIRRDKEQL--VAREKFLEAVERRRQMTEEERREGDKELDKMQPKREIKH 113 YE WKLRE++R++R++++ AREK +++ M+EEER + + K+ ++ K Sbjct 304 YEAWKLREMKRLKRNRDEREEAAREK--AELDKIHAMSEEERLKYLRLNPKVITNKQDKG 361 Query 114 KYQFMQKYYHRGAFFQDLARSGEEPIYLRDFNAPVGEDAVDKKALPKILQLR 165 KY+F+QKY+HRGAFF D E+ + R+F +D DK LPK++Q++ Sbjct 362 KYKFLQKYFHRGAFFLD----EEDEVLKRNFAEATNDDQFDKTILPKVMQVK 409 > YER008c Length=1336 Score = 32.0 bits (71), Expect = 0.59, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 5/98 (5%) Query 23 QQQQQQQQQQQQNMLEGEEEMPDDTDGLDPAQEYEDWKLRELERIRRDKEQLVAREKFLE 82 Q++ Q Q++ + LE E + + E++ R+LE R ++ + +K +E Sbjct 348 QKRLQLQKENEMKRLEEERRIKQEERKRQMELEHQ----RQLEEEERKRQMELEAKKQME 403 Query 83 AVERRRQMTEEERREGDKELDKMQPKREIKHKYQFMQK 120 ++R+RQ EE+R + ++EL ++Q K+ + + ++K Sbjct 404 -LKRQRQFEEEQRLKKERELLEIQRKQREQETAERLKK 440 Lambda K H 0.314 0.131 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2353551590 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40