bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_0939_orf2 Length=126 Score E Sequences producing significant alignments: (Bits) Value At3g46960 62.0 3e-10 7301051 58.5 3e-09 SPCC550.03c 58.5 3e-09 Hs20631987 55.8 2e-08 ECU04g0910 50.8 5e-07 YLR398c 48.9 2e-06 CE06562 48.9 2e-06 7298249 47.4 7e-06 At1g59760 45.8 2e-05 CE20651 45.8 2e-05 Hs14721269 43.5 9e-05 YJL050w 42.7 2e-04 SPAC17H9.02 39.3 0.002 At2g06990 38.9 0.003 ECU04g1290 38.5 0.003 SPAC6F12.16c 38.5 0.003 > At3g46960 Length=1347 Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 11/86 (12%) Query 49 AAAAAAAAAAAVTGAA--------AAAPTDTASPSTAAADLSPEEEPLAIEFGFPLDDFQ 100 +A A + AVTG++ A D+ + +L P+ +AIEF F LD+FQ Sbjct 300 SAKTAIMSEEAVTGSSDKQLRKEGWATKGDSQDIADRFYELVPD---MAIEFPFELDNFQ 356 Query 101 KRAILRLEKNQCVFVAAHTSAGKTVV 126 K AI LEK + VFVAAHTSAGKTVV Sbjct 357 KEAICCLEKGESVFVAAHTSAGKTVV 382 > 7301051 Length=474 Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/38 (73%), Positives = 33/38 (86%), Gaps = 0/38 (0%) Query 89 AIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 A++F F LD FQK+AIL+LE+ Q VFVAAHTSAGKTVV Sbjct 256 AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVV 293 > SPCC550.03c Length=1213 Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 3/61 (4%) Query 66 AAPTDTASPSTAAADLSPEEEPLAIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTV 125 A D+++P L PE +A++F F LD+FQK AI LE VFVAAHTSAGKTV Sbjct 254 AHVVDSSAPIENFQQLVPE---MALDFPFELDNFQKEAIYHLEMGDSVFVAAHTSAGKTV 310 Query 126 V 126 V Sbjct 311 V 311 > Hs20631987 Length=1246 Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 3/61 (4%) Query 66 AAPTDTASPSTAAADLSPEEEPLAIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTV 125 A P D SP L P+ A ++ F D FQK+AIL LE++ VFVAAHTSAGKTV Sbjct 284 AIPVDATSPVGDFYRLIPQP---AFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTV 340 Query 126 V 126 V Sbjct 341 V 341 > ECU04g0910 Length=933 Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 2/55 (3%) Query 74 PSTAAADLSPEE--EPLAIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 P AA L P++ +P A + F LDDFQK ++ LE+++ V V+AHTS+GKTVV Sbjct 47 PVGAAYTLLPKQFCKPAAKNYLFELDDFQKISVCSLERDESVLVSAHTSSGKTVV 101 > YLR398c Length=1287 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/33 (69%), Positives = 25/33 (75%), Gaps = 0/33 (0%) Query 94 FPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 F LD FQK A+ LE+ VFVAAHTSAGKTVV Sbjct 328 FELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVV 360 > CE06562 Length=1026 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/35 (65%), Positives = 28/35 (80%), Gaps = 0/35 (0%) Query 92 FGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 + F LD FQK+AIL ++ NQ V V+AHTSAGKTVV Sbjct 122 YPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVV 156 > 7298249 Length=1055 Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 48/95 (50%), Gaps = 13/95 (13%) Query 32 SAALESALRAQVAPPPDAAAAAAAAAAAVTGAAAAAPTDTASPSTAAADLSPEEEPLAIE 91 SA LE ALR ++ A + T AA P P L P A E Sbjct 101 SATLE-ALRTRIV------THLLDAPKSCTHEVAAHPDQEYIP------LKPFSGVPAKE 147 Query 92 FGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 + F LD FQ++AIL ++ +Q V V+AHTSAGKTVV Sbjct 148 YPFVLDPFQRQAILCIDNSQSVLVSAHTSAGKTVV 182 > At1g59760 Length=988 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 3/98 (3%) Query 31 GSAALESALRAQVAPPPDAAAAAAAAAAAVTGAAAAAPTDTASPSTAAADLSP--EEEPL 88 GS +S + + PP + + D + P L+P +P Sbjct 2 GSVKRKSVEESSDSAPPQKVQREDDSTQIINEELVGCVHDVSFPENYVP-LAPSVHNKPP 60 Query 89 AIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 A +F F LD FQ AI L+ + V V+AHTSAGKTVV Sbjct 61 AKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVV 98 > CE20651 Length=1260 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 31/39 (79%), Gaps = 0/39 (0%) Query 88 LAIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 +A ++ F LD FQ+ ++L +E+ + +FVAAHTSAGKTVV Sbjct 279 MARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVV 317 > Hs14721269 Length=1042 Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 0/35 (0%) Query 91 EFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTV 125 E+ F LD FQ+ AI ++ NQ V V+AHTSAGKTV Sbjct 135 EYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTV 169 > YJL050w Length=1073 Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 26/112 (23%) Query 15 AAAAAARQQQQQAAAGGSAALESALRAQVAPPPDAAAAAAAAAAAVTGAAAAAPTDTASP 74 A+ + Q G L +R QVA PP+ A V A Sbjct 95 ASKGLTNSETLQVEQDGKVRLSHQVRHQVALPPNYDYTPIAEHKRVNEART--------- 145 Query 75 STAAADLSPEEEPLAIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 + F LD FQ AI +++ + V V+AHTSAGKTVV Sbjct 146 -----------------YPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVV 180 > SPAC17H9.02 Length=1030 Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 0/35 (0%) Query 92 FGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 + F LD FQ AI +E+ + V V+AHTSAGKTV+ Sbjct 122 YPFELDPFQSTAIKCVERMESVLVSAHTSAGKTVI 156 > At2g06990 Length=996 Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Query 37 SALRAQVAPPPDAAAAAAAAAAAVTGAAAAAPTDTASPSTAAADLSPEEEPLAIEFGFPL 96 S LR+ P P+ + A A P D +P+ + P + F L Sbjct 16 SKLRSDETPTPEPRTKRRSLKRACV-HEVAVPND-YTPTKEETIHGTLDNPT---YPFKL 70 Query 97 DDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 D FQ ++ LE+ + + V+AHTSAGKT V Sbjct 71 DPFQSVSVACLERKESILVSAHTSAGKTAV 100 > ECU04g1290 Length=881 Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%) Query 84 EEEPLAIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 +E+ L I GF D FQ++A L + VFV+AHTS+GKT+V Sbjct 55 DEKILNI--GFEPDTFQRQAFYLLSRASSVFVSAHTSSGKTLV 95 > SPAC6F12.16c Length=1117 Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%) Query 74 PSTAAADLSPEEEPL--AIEFGFPLDDFQKRAILRLEKNQCVFVAAHTSAGKTVV 126 P+ +S + P+ A + F LD FQ +I +E+ + V V+AHTSAGKTVV Sbjct 175 PNYDYVPISKHKSPIPPARTYPFTLDPFQAVSIACIERQESVLVSAHTSAGKTVV 229 Lambda K H 0.314 0.121 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1180352192 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40