bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_1043_orf1
Length=86
Score E
Sequences producing significant alignments: (Bits) Value
SPACUNK4.07c 52.4 2e-07
7297823 49.3 2e-06
YEL031w 46.6 1e-05
Hs9966897 45.8 2e-05
At5g23630 43.5 9e-05
CE08059 40.4 7e-04
SPCC1672.11c 33.9 0.066
CE08049 28.9 2.5
YML125c 28.9 2.6
CE23891 27.3 7.9
7290401 26.9 9.5
> SPACUNK4.07c
Length=1211
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query 1 CVCLWLLDGYWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHR-KHCNST 59
C LW LD YW F L ++F++I +E ++ +R L R M P + V+R KH
Sbjct 208 CCVLWCLDDYWYFSLFSMFMIIALECSVVWQRQRTLTEFRTMSIKPYEIQVYRNKH---- 263
Query 60 GGSTCSWQLIKAAGLLPGDV 79
W I LLP DV
Sbjct 264 ------WFPISTEDLLPNDV 277
> 7297823
Length=1225
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query 2 VCLWLLDGYWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHRKHCNSTGG 61
V LW +D YW + L TLF+LI E + R + +R+M P +Y R++
Sbjct 260 VGLWCMDDYWYYSLFTLFMLIAFECTIVKQQLRNMSEIRKMGNKPYLIYAFRQN------ 313
Query 62 STCSWQLIKAAGLLPGDV 79
W+ + + LLPGD+
Sbjct 314 ---KWRHLGSDELLPGDL 328
> YEL031w
Length=1215
Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query 1 CVCLWLLDGYWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHRKHCNSTG 60
CV LWLLD +W + L LF++I +EA F+ L R M P + V R
Sbjct 208 CVALWLLDEFWYYSLFNLFMIISMEAAAVFQRLTALKEFRTMGIKPYTINVFRNK----- 262
Query 61 GSTCSWQLIKAAGLLPGDV 79
W ++ LLP D+
Sbjct 263 ----KWVALQTNELLPMDL 277
> Hs9966897
Length=1086
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query 1 CVCLWLLDGYWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHRKHCNSTG 60
CV LW LD YW + + TL +L+ EA + R + +R+M P + V+R
Sbjct 135 CVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPHMIQVYRSR----- 189
Query 61 GSTCSWQLIKAAGLLPGDV 79
W+ I + ++PGD+
Sbjct 190 ----KWRPIASDEIVPGDI 204
> At5g23630
Length=1179
Score = 43.5 bits (101), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query 1 CVCLWLLDGYWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHRKHCNSTG 60
CV LW LD +W + + TLF+L + E+ A + L +R ++ V V+R
Sbjct 209 CVGLWCLDEFWYYSVFTLFMLFMFESTMAKSRLKTLTDLRSVRVDSQTVMVYR------- 261
Query 61 GSTCSWQLIKAAGLLPGDV 79
+ W + LLPGDV
Sbjct 262 --SGKWVKLLGTDLLPGDV 278
> CE08059
Length=1157
Score = 40.4 bits (93), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query 1 CVCLWLLDGYWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHRKHCNSTG 60
CV LW L+ W + L TLF+L+ EA + + + +R M + V R
Sbjct 202 CVGLWCLEDMWYYSLFTLFMLMTFEATLVKQQMKNMSEIRNMGNKTYMINVLRGK----- 256
Query 61 GSTCSWQLIKAAGLLPGDV 79
WQ IK L+ GD+
Sbjct 257 ----KWQKIKIEELVAGDI 271
> SPCC1672.11c
Length=1315
Score = 33.9 bits (76), Expect = 0.066, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query 2 VCLWLLDGYWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHRKHCNSTGG 61
+ LW +D Y+ + + L + +V + + R+ L R+R+M V V+R
Sbjct 342 IILWSMDSYYYYAICILIISVVSILGSLIETRKTLRRMREMSRFTCPVRVYRDG------ 395
Query 62 STCSWQLIKAAGLLPGDVF 80
W I + L+ GDVF
Sbjct 396 ---FWTSISSTDLVIGDVF 411
> CE08049
Length=348
Score = 28.9 bits (63), Expect = 2.5, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query 9 GYWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHRKHCNSTGGSTCSWQL 68
G L TLFL ++ F R +LR P RVY + CN ST W
Sbjct 136 GRQNLELITLFLCYKIK----FYDRFYMLRGNHECPAVNRVYGFYEECNKRYASTRLWLA 191
Query 69 IKAA-------GLLPGDVFC 81
+ A GL+ G + C
Sbjct 192 FQEAFAAMPFTGLISGRILC 211
> YML125c
Length=312
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query 11 WGFPLSTLFLLIVVEAQTAFKHRREL 36
W P+ LF++I V A +A+K RR L
Sbjct 44 WSLPI--LFMIIFVRAYSAYKRRRSL 67
> CE23891
Length=320
Score = 27.3 bits (59), Expect = 7.9, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 0/73 (0%)
Query 10 YWGFPLSTLFLLIVVEAQTAFKHRRELLRVRQMQPVPPRVYVHRKHCNSTGGSTCSWQLI 69
Y+ LST+F++I+ + Q E LRV + R+Y+ N + S +I
Sbjct 139 YFPLILSTIFVVIIFKTQVWTVQAEEELRVVNIDGNNSRMYLIFAILNYSHWPNTSNLVI 198
Query 70 KAAGLLPGDVFCW 82
A LL V C+
Sbjct 199 YGACLLASPVICF 211
> 7290401
Length=502
Score = 26.9 bits (58), Expect = 9.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query 27 QTAFKHRRELLRVRQMQPVPPRVYVHRKHCNS 58
Q FKH+ L ++ QP+PP + + +C S
Sbjct 314 QANFKHQTSL---KEHQPLPPPITIATGYCGS 342
Lambda K H
0.330 0.143 0.513
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1190857334
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40