bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_1100_orf2
Length=78
Score E
Sequences producing significant alignments: (Bits) Value
Hs5031653 47.0 7e-06
CE01400 46.2 1e-05
7301643 41.2 5e-04
At3g18160_2 40.8 5e-04
Hs13637631 27.7 5.1
At2g22040 27.3 6.7
At3g54870 26.9 8.2
7304095 26.9 9.0
> Hs5031653
Length=225
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query 3 MLGKEIARKAKGEPIPELDLSKYTSFSVPSGSKAGDVKAWEKTVINCQQLLQHAATAHIN 62
++ E R A +PI L + +Y PS + D+ AW++ V N L+H A N
Sbjct 65 IMRNEFERLAARQPIELLSMKRY-ELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIEN 123
Query 63 LELMNAHAAASWQ 75
LELM+ H +W+
Sbjct 124 LELMSQHGCNAWK 136
> CE01400
Length=254
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query 6 KEIARKAKGEPIPELDLSKYTSFSVPSGSKAGDVKAWEKTVINCQQLLQHAATAHINLEL 65
KE+ R K E + +LD+S+ PS K D K W K + N + +H INLEL
Sbjct 94 KEMDRMKKKEEMGKLDMSR-CELPAPSAVKGVDRKLWAKVLRNAKAQNEHLLMRQINLEL 152
Query 66 MNAHAAASW-QRH 77
M+ +AA S+ QR+
Sbjct 153 MDEYAAESYLQRN 165
> 7301643
Length=278
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query 3 MLGKEIARKAKGEPIPELDLSKYTSFSVPSGSKAGDVKAWEKTVINCQQLLQHAATAHIN 62
++ E R P+ L + +Y PSG K +V AW++ + N L+H +N
Sbjct 59 LMANEFERIQNRLPMETLSMKRYELPPPPSG-KLSEVSAWQEAIENSMAQLEHQWVRSLN 117
Query 63 LELMNAHAAASWQRHL 78
LELM + +W+ +L
Sbjct 118 LELMLDYGTEAWKSYL 133
> At3g18160_2
Length=222
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 0/75 (0%)
Query 3 MLGKEIARKAKGEPIPELDLSKYTSFSVPSGSKAGDVKAWEKTVINCQQLLQHAATAHIN 62
+LGKE R G+P +D +P +K D AW++ + Q+ LQ N
Sbjct 53 VLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAAWKQYLQKNQRSLQQKLIELEN 112
Query 63 LELMNAHAAASWQRH 77
LELM+ W+++
Sbjct 113 LELMSKLGPELWRQN 127
> Hs13637631
Length=293
Score = 27.7 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query 1 ETMLGKEIARKAKGEPIPELDLSKYTSFSVPSGSKAGDVKAWEKTVIN 48
+ LG EIA + + L L+ T+FS +G K+G +K++++ IN
Sbjct 89 DNTLGTEIA--IEDQICQGLKLTFDTTFSPNTGKKSGKIKSYKRECIN 134
> At2g22040
Length=312
Score = 27.3 bits (59), Expect = 6.7, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 0/28 (0%)
Query 24 KYTSFSVPSGSKAGDVKAWEKTVINCQQ 51
+YT + SGS+ G VK W+ V CQ+
Sbjct 93 QYTGHMMYSGSEDGSVKIWDLRVRECQR 120
> At3g54870
Length=1070
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query 15 EPIPELDLSKYTSFSVPSGSKAGDVKAWEKTVINCQ------QLLQ------HAATAHIN 62
E I +L + + S+ +K G+V TV+N Q Q+LQ HAA +N
Sbjct 260 ETIQDLLAPEKNNISINEDAKTGEVSVPGATVVNIQDLDHFLQVLQVGETNRHAANTKMN 319
Query 63 LELMNAHA 70
E +HA
Sbjct 320 TESSRSHA 327
> 7304095
Length=1019
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query 15 EPIPE----LDLSKYTSFSVPSGSKAGDVKAWEKTVINCQQLLQHAATAHINLEL 65
+P+P+ DL Y GD KAW ++NC++ A H N ++
Sbjct 343 KPVPDDKRGFDLISYNRPYHFQAEDEGDQKAWMAVLVNCKEKALTKAFQHANPQM 397
Lambda K H
0.313 0.125 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1171925608
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40