bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_1169_orf1 Length=123 Score E Sequences producing significant alignments: (Bits) Value At5g40530 96.3 1e-20 CE17217 92.0 2e-19 Hs12758125 87.0 8e-18 SPAC56F8.09 82.4 2e-16 7302510 79.3 2e-15 YDR083w 77.0 8e-15 ECU10g0800 65.1 3e-11 SPCC1259.10 30.0 0.96 At5g03720 29.3 1.9 Hs20471637 28.9 2.7 At5g16750 28.1 4.4 7291988 27.7 5.4 YHR131c 27.7 6.0 At1g64210 27.7 6.1 7297820 27.3 6.7 Hs4557263 27.3 6.8 > At5g40530 Length=285 Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 11/128 (8%) Query 3 PSADEKRETMANLQQQKERQLLLVKKFSGRVAA-------AGVID----RLQGGRFRSLN 51 PS +E ET Q +K+ Q + G +A + +D RL GG+FR LN Sbjct 22 PSKEEPIETTPKNQNEKKNQRDTKNQQHGGSSAPSKRPKPSNFLDALRERLSGGQFRMLN 81 Query 52 EYLYTKKGSEAFVKYQKEPQLFDIYHTGYRAQVRRWPLNPLDCVATWLSKKPKEWVVGDF 111 E LYT G EA ++++PQ+FD+YHTGY+ Q+ WP P++ + WL VV DF Sbjct 82 EKLYTCSGKEALDYFKEDPQMFDMYHTGYQQQMSNWPELPVNSIINWLLSNSSSLVVADF 141 Query 112 GCGEAALA 119 GCG+A +A Sbjct 142 GCGDARIA 149 > CE17217 Length=343 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 0/79 (0%) Query 41 RLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQLFDIYHTGYRAQVRRWPLNPLDCVATWLS 100 RL GRFR LNE LYT GSEAF ++++P FD+YH G+ QV++WP +PL + WL Sbjct 133 RLDAGRFRFLNEKLYTCTGSEAFDFFKEDPTAFDLYHKGFADQVKKWPNHPLREIIRWLQ 192 Query 101 KKPKEWVVGDFGCGEAALA 119 KP + V D GCGEA +A Sbjct 193 SKPDQQSVFDLGCGEAKIA 211 > Hs12758125 Length=456 Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 0/84 (0%) Query 36 AGVIDRLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQLFDIYHTGYRAQVRRWPLNPLDCV 95 A + RL G RFR LNE LY+ S A +Q++P+ F +YH G+++QV++WPL P+D + Sbjct 240 ARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRI 299 Query 96 ATWLSKKPKEWVVGDFGCGEAALA 119 A L ++P VV DFGCG+ LA Sbjct 300 ARDLRQRPASLVVADFGCGDCRLA 323 > SPAC56F8.09 Length=318 Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 8/91 (8%) Query 40 DRLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQLFDIYHTGYRAQVRRWPLNPLDCVATWL 99 D+L G FR +NE LYT + +A +++ P LFDIYH G+R QV WP NP+D L Sbjct 95 DKLDGANFRWINEQLYTTESDKAVQMFKENPDLFDIYHAGFRYQVEGWPENPVDIFIQHL 154 Query 100 --------SKKPKEWVVGDFGCGEAALALRF 122 +KK V+ D GCGEA +A F Sbjct 155 KIRFEHSNAKKKNNIVIADLGCGEAKIASTF 185 > 7302510 Length=358 Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 0/89 (0%) Query 35 AAGVIDRLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQLFDIYHTGYRAQVRRWPLNPLDC 94 A+ + L GGRFR +NE LY+ +A ++K+ F+ YH GYR QV +WP+NPL+ Sbjct 143 ASKLQSELLGGRFRYINEQLYSTTSRKAEALFRKDSSAFEAYHAGYRQQVEKWPINPLNR 202 Query 95 VATWLSKKPKEWVVGDFGCGEAALALRFP 123 + + K PK ++GDFGCGE LA P Sbjct 203 IIKTIKKIPKTAIIGDFGCGEGKLAQSVP 231 > YDR083w Length=402 Score = 77.0 bits (188), Expect = 8e-15, Method: Composition-based stats. Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 16/99 (16%) Query 38 VIDRLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQLFDIYHTGYRAQVRRWPLNPLDCVAT 97 ++ +L G RFR +NE LYT EA +++PQLFD YH G+R+QV+ WP NP+D Sbjct 136 MMAKLTGSRFRWINEQLYTISSDEALKLIKEQPQLFDEYHDGFRSQVQAWPENPVDVFVD 195 Query 98 WLS----------------KKPKEWVVGDFGCGEAALAL 120 + K KE V+ D GCGEA LAL Sbjct 196 QIRYRCMKPVNAPGGLPGLKDSKEIVIADMGCGEAQLAL 234 > ECU10g0800 Length=210 Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 8/85 (9%) Query 38 VIDRLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQLFDIYHTGYRAQVRRWPLNPLDCVAT 97 + RL+GG+FR LN+ +Y KG +YH Y QV +WP+NPLD + Sbjct 7 ITKRLEGGKFRMLNDKMYHGKGLRK--------GDLRLYHELYNLQVMKWPVNPLDVIIE 58 Query 98 WLSKKPKEWVVGDFGCGEAALALRF 122 + ++ V+ D GCGEA +A F Sbjct 59 KIKRREGNGVIADIGCGEARIAREF 83 > SPCC1259.10 Length=412 Score = 30.0 bits (66), Expect = 0.96, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Query 75 IYHTGYRAQ-----VRRWPLNPLDCVATWLSKKPKE 105 ++ GY + +R+WP+N + V WL+KK K+ Sbjct 376 MFKAGYTSSFDVEPIRKWPINQILTVEGWLTKKNKK 411 > At5g03720 Length=476 Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 6/57 (10%) Query 17 QQKERQLL--LVKKFSGRVAAAGVIDRLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQ 71 +Q+++QLL L K F R G ++RL+ + + L +K + F+K+ ++PQ Sbjct 275 EQRQKQLLSFLAKLFQNR----GFLERLKNFKGKEKGGALGLEKARKKFIKHHQQPQ 327 > Hs20471637 Length=176 Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%) Query 28 KFSGRVAAAGVIDRLQGGRFRSLNEYLYTKKGSEAFV-KYQKEPQLFDIYH---TGYRAQ 83 F+ +G+ R QGGR L+ +L + S+ + K Q E Q+ D +H TG Sbjct 51 HFAHDSFTSGLETRYQGGR-HGLHHFLSSTSRSQLLILKPQAEVQMQDFFHLQPTG---- 105 Query 84 VRRW 87 VRRW Sbjct 106 VRRW 109 > At5g16750 Length=876 Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 0/24 (0%) Query 75 IYHTGYRAQVRRWPLNPLDCVATW 98 ++ G+ Q+R W L L C+ +W Sbjct 75 LFSAGHSRQIRVWDLETLKCIRSW 98 > 7291988 Length=288 Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 9/47 (19%) Query 35 AAGVIDRLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQLFDIYHTGYR 81 AA + DR G+ + E+L YQ P+L+D++H YR Sbjct 2 AAALPDRFSAGKRQFWREFL---------ALYQGMPELWDVHHLNYR 39 > YHR131c Length=840 Score = 27.7 bits (60), Expect = 6.0, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 8/66 (12%) Query 60 SEAFVKYQKEPQLFDIYHTG--------YRAQVRRWPLNPLDCVATWLSKKPKEWVVGDF 111 S+ F++ P L Y TG R + + LD T LSK P E ++ Sbjct 338 SQRFIRSNSRPDLIQRYSTGSSTNNNTTIRERSNTFTAGLLDHYCTGLSKTPTEALISSA 397 Query 112 GCGEAA 117 GE++ Sbjct 398 ASGESS 403 > At1g64210 Length=587 Score = 27.7 bits (60), Expect = 6.1, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Query 50 LNEYLYTKKGSEAFVKYQKEPQLFDIYHTGYRAQVRRWPLN 90 L Y Y+K A Y LF+I H G R + R PL+ Sbjct 365 LKAYYYSKDDKLAVYSYYNHGSLFEILH-GNRGRYHRVPLD 404 > 7297820 Length=816 Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query 5 ADEKRETMANLQQQKERQLLLVK------KFSGRVAAAGVIDRLQGGRFRSLNEYLYTKK 58 D+ E +++Q +QL++ K K G VA + L + L+ Y+K+ Sbjct 578 TDDICEIGVRMEEQLAKQLMMCKNTRDHHKAMGDVAGMNRFENLALTVQKDLDLVRYSKR 637 Query 59 GSEAFVKYQKEPQLFDIYH 77 +E K+ E + F+I H Sbjct 638 KNEPLPKFHYEKRSFNIVH 656 > Hs4557263 Length=357 Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 0/51 (0%) Query 27 KKFSGRVAAAGVIDRLQGGRFRSLNEYLYTKKGSEAFVKYQKEPQLFDIYH 77 +K ++A G +D L GR+R ++ + +EA V+ K P+L +Y+ Sbjct 31 EKIHRQLAQLGGLDALDVGRWRVSDDTVMHLATAEALVEAGKAPKLTQLYY 81 Lambda K H 0.320 0.136 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1191192512 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40