bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_1180_orf1
Length=137
Score E
Sequences producing significant alignments: (Bits) Value
CE16096 64.3 6e-11
At4g27890 55.8 2e-08
At5g53400 54.3 6e-08
Hs5729953 50.4 9e-07
7294052 48.1 5e-06
At5g58740 41.6 4e-04
SPBC19F8.02 35.0 0.045
Hs13357210 32.3 0.30
At5g16260 28.1 4.8
Hs22044457 28.1 5.0
CE24746 27.7 6.6
7300294_2 27.7 7.4
Hs11415048 27.3 8.6
7293238 27.3 8.6
At4g23860 27.3 8.6
> CE16096
Length=320
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query 40 KHQVQNATAS-SKSTGEEGSTS------DEERESSRPE-GNGGQTDKYRWTQTLESVDVY 91
K Q +N+ + K EG TS DE+ + +P GNG KY+WTQTL+ ++V
Sbjct 114 KEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADLAKYQWTQTLQELEVK 173
Query 92 VPMGEG--VRASQCQVKITATTLTLGFKGQAPILSGEFSQRVQAED 135
+P+ G +++ VKI T++++G K QAPI+ G+ ++ E+
Sbjct 174 IPIAAGFAIKSRDVVVKIEKTSVSVGLKNQAPIVDGKLPHAIKVEN 219
> At4g27890
Length=293
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 0/66 (0%)
Query 70 EGNGGQTDKYRWTQTLESVDVYVPMGEGVRASQCQVKITATTLTLGFKGQAPILSGEFSQ 129
+GNG +KY W Q L+ V + +PM EG ++ +I L +G KGQ I+ GEF
Sbjct 127 KGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFN 186
Query 130 RVQAED 135
V+ +D
Sbjct 187 SVKPDD 192
> At5g53400
Length=304
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 0/66 (0%)
Query 70 EGNGGQTDKYRWTQTLESVDVYVPMGEGVRASQCQVKITATTLTLGFKGQAPILSGEFSQ 129
+GNG + Y W Q L+ V V +P+ G +A +I L +G KGQ PI+ GE +
Sbjct 138 KGNGTDLENYSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYR 197
Query 130 RVQAED 135
V+ +D
Sbjct 198 SVKPDD 203
> Hs5729953
Length=331
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query 71 GNGGQTDKYRWTQTLESVDVYVPMGEGVR--ASQCQVKITATTLTLGFKGQAPILSGEFS 128
GNG YRWTQTL +D+ VP R V I L +G KGQ I+ GE
Sbjct 164 GNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELY 223
Query 129 QRVQAEDS 136
V+ E+S
Sbjct 224 NEVKVEES 231
> 7294052
Length=332
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 18/85 (21%)
Query 71 GNGGQTDKYRWTQTLESVDV----------------YVPMGE--GVRASQCQVKITATTL 112
GNG + Y WTQTLE V+V +P G+RA + I +L
Sbjct 165 GNGCTLENYTWTQTLEEVEVSPGTSLTPYFSYLAQLKIPFNLTFGLRARDLVISIGKKSL 224
Query 113 TLGFKGQAPILSGEFSQRVQAEDSM 137
+G KGQ PI+ GE V+ E+S+
Sbjct 225 KVGIKGQTPIIDGELCGEVKTEESV 249
> At5g58740
Length=158
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 0/56 (0%)
Query 79 YRWTQTLESVDVYVPMGEGVRASQCQVKITATTLTLGFKGQAPILSGEFSQRVQAE 134
+ W QTLE V++Y+ + V KI + + +G KG P L+ + S V+ +
Sbjct 21 FEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGNPPYLNHDLSAPVKTD 76
> SPBC19F8.02
Length=166
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query 78 KYRWTQTLESVDVYVPMGEGVRASQCQVKITATTLTLGFK--GQAPILSGEFSQRVQAED 135
+Y W QT+ VD+ + + +G RA QV ++ L + + +LSG +++ ++
Sbjct 10 EYEWDQTIADVDIVIHVPKGTRAKSLQVDMSNHDLKIQINVPERKVLLSGPLEKQINLDE 69
Query 136 S 136
S
Sbjct 70 S 70
> Hs13357210
Length=220
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query 72 NGGQTDKYRWTQTLESVDVYVPMGEG-VRASQCQVKITATTLTLGF---KGQAPILSGEF 127
NG + Y W+Q ++V VP+ + V+ Q V ++++++ + G+ ++ G+
Sbjct 42 NGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKL 101
Query 128 SQRVQAEDSM 137
+ ++ E S+
Sbjct 102 THKINTESSL 111
> At5g16260
Length=519
Score = 28.1 bits (61), Expect = 4.8, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query 39 FKHQVQNATASSKS------TGEEGSTSDEERESSRPEGNGGQTD----KYRWTQTLESV 88
++ ++++A A ++ +G E D ER SS PEG TD KY+W +
Sbjct 122 WQREIKDAEAEAERLKNGSVSGTELVEDDHERASSPPEGEDEFTDDDGTKYKWDRARR-- 179
Query 89 DVYVP 93
V+VP
Sbjct 180 -VWVP 183
> Hs22044457
Length=170
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query 48 ASSKSTGEEGSTSDEERESSRPEGNGGQTDKYRWTQTLESV--DVYVPMGEGV-RASQCQ 104
A + GE D + +RP G G++ WTQ L ++ P+ EG+ RA C
Sbjct 100 AQDELPGESAGAEDSDDPETRPNGEKGESK--LWTQKLFTLMYKTSKPIDEGLSRAEPCY 157
Query 105 VKIT 108
+ IT
Sbjct 158 LLIT 161
> CE24746
Length=745
Score = 27.7 bits (60), Expect = 6.6, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query 47 TASSKSTGEEGSTSDEERESSRPEGNGGQTDKYRWTQTLESVDVYVPMGEGVRASQCQVK 106
TA K TGE S +R +G G K +W+Q E D+ +G G Q+
Sbjct 352 TAFLKPTGEVVDMSSFSIYGTRFDGGGVDLLK-KWSQQTERKDIVFAIGNGTNTYNTQIA 410
Query 107 IT 108
++
Sbjct 411 VS 412
> 7300294_2
Length=188
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query 72 NGGQTDKYRWTQTLESVDVYVPMGEGVR-ASQCQVKITATTLTLGFK--GQAPILSGEFS 128
NG + + W+QTL+ V+V + + + A + + I A + + K + IL G S
Sbjct 13 NGDVFETHCWSQTLKDVEVQALLPKDHQTAKKLHISIQAQHIKVSSKHSPETIILEGNLS 72
Query 129 QRVQAEDSM 137
QR++ ++++
Sbjct 73 QRIKHKEAV 81
> Hs11415048
Length=460
Score = 27.3 bits (59), Expect = 8.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 0/27 (0%)
Query 45 NATASSKSTGEEGSTSDEERESSRPEG 71
+ A S G++G +DE+ E+ RP+G
Sbjct 64 DTAAGSGEDGKKGGDTDEDSEADRPKG 90
> 7293238
Length=1137
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 0/51 (0%)
Query 27 CMYIHVLNILLVFKHQVQNATASSKSTGEEGSTSDEERESSRPEGNGGQTD 77
C+ H++N++L +K Q+ +S + + S DE+ + E Q D
Sbjct 380 CIEPHLVNLILNYKQQICKGNRASNISNYKNSDDDEKIQPEVGEEQDRQVD 430
> At4g23860
Length=443
Score = 27.3 bits (59), Expect = 8.6, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query 42 QVQNATASSKSTGEEGSTSDEERESSRPEGNGGQTDKYRWTQTLESVDVYVPMGEGVRAS 101
Q +N T + KS ++ S +E E+ +PE N + +K+ + E +D E V A+
Sbjct 263 QPENGTEAEKSVVQKCSEKIDESEAGQPE-NSTEAEKFVVRKCSEKID----GSENVPAA 317
Query 102 QCQVK 106
C ++
Sbjct 318 GCVIR 322
Lambda K H
0.316 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1461889840
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40