bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Emax_1417_orf1
Length=138
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  At3g13970                                                           67.0    1e-11
  At1g54210                                                           65.9    2e-11
  SPAC1783.06c                                                        53.9    1e-07
  Hs4757758                                                           52.0    4e-07
  YBR217w                                                             46.2    2e-05


> At3g13970
Length=277

 Score = 67.0 bits (162),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 0/68 (0%)

Query  69   KVRVHLTAVGEAPRLRLKEFAVDGFETFAAVVNFLQKALKRREIHVYLNSSFKPQPNEYI  128
            K+ VHL A G AP L+  +F V G + FA V++FL++ L    + VY+NS+F P P+E +
Sbjct  11   KIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSAFSPNPDESV  70

Query  129  ADLFQKFA  136
             DL+  F 
Sbjct  71   IDLYNNFG  78


> At1g54210
Length=96

 Score = 65.9 bits (159),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 0/68 (0%)

Query  69   KVRVHLTAVGEAPRLRLKEFAVDGFETFAAVVNFLQKALKRREIHVYLNSSFKPQPNEYI  128
            KV VHL A G AP L+  +F + G + FA V++FL++ L    + VY+NS+F P P+E +
Sbjct  13   KVVVHLRATGGAPILKQSKFKIPGTDKFAKVIDFLRRQLHSDSLFVYVNSAFSPNPDESV  72

Query  129  ADLFQKFA  136
             DL+  F 
Sbjct  73   IDLYNNFG  80


> SPAC1783.06c
Length=132

 Score = 53.9 bits (128),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query  58   VETHLRSLR---DFKVRVHLTAVGEAPRLRLKEFAVDGFETFAAVVNFLQKALK---RRE  111
            +ET + + R   + +V +   A+G  P LR   F+++  + F  V  FL+K L       
Sbjct  32   IETIINTYREKENRRVNLRFKAIGRTPLLRKTVFSINASQRFEKVTRFLKKELGLPMNSS  91

Query  112  IHVYLNSSFKPQPNEYIADLFQKFAV  137
            + +Y+NSSF P P+E + +L+  FA+
Sbjct  92   LVLYVNSSFAPSPDEIVGNLYDNFAI  117


> Hs4757758
Length=140

 Score = 52.0 bits (123),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 3/71 (4%)

Query  69   KVRVHLTAVGEAPRLRLKEFAVDGFETFAAVVNFLQKALK---RREIHVYLNSSFKPQPN  125
            K+ + L AVG+ P ++ K++AV+   T   +++F++K LK     ++ +Y+N SF P P+
Sbjct  54   KIDILLKAVGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFAPSPD  113

Query  126  EYIADLFQKFA  136
            + +  L++ F 
Sbjct  114  QEVGTLYECFG  124


> YBR217w
Length=186

 Score = 46.2 bits (108),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 0/67 (0%)

Query  69   KVRVHLTAVGEAPRLRLKEFAVDGFETFAAVVNFLQKALKRREIHVYLNSSFKPQPNEYI  128
            K+++    +G   +L+     +   ++FA V+ FL++ LK   ++ Y+N+SF P P + I
Sbjct  103  KIQIKFQPIGSIGQLKPSVCKISMSQSFAMVILFLKRRLKMDHVYCYINNSFAPSPQQNI  162

Query  129  ADLFQKF  135
             +L+ +F
Sbjct  163  GELWMQF  169



Lambda     K      H
   0.318    0.129    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1498437086


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40