bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_1421_orf1 Length=110 Score E Sequences producing significant alignments: (Bits) Value Hs6912676 72.0 3e-13 SPCC188.11 68.9 2e-12 At1g77180 57.4 6e-09 CE06519 41.6 3e-04 YAL032c 41.6 4e-04 CE28289 27.7 5.9 CE28463 27.3 6.4 CE28288 27.3 6.6 At3g23240 26.9 9.9 > Hs6912676 Length=536 Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 24/121 (19%) Query 2 IPQP----DSMFDARLFNQGGGTDSGYKGGEDDTYNLYDRPLFAQRGGA----GIYQFSR 53 +P P + +D RLFNQ G DSG+ GGED+ YN+YD+ A RGG IY+ S+ Sbjct 396 VPNPRTSNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQ---AWRGGKDMAQSIYRPSK 452 Query 54 DRFASSVGENSEL----------ASFAGADKTRYTRTGPVEFEKDVADPFGLDNLLSEAH 103 + G++ E F+G+D+ + R GPV+FE+ DPFGLD L EA Sbjct 453 NLDKDMYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE---DPFGLDKFLEEAK 509 Query 104 K 104 + Sbjct 510 Q 510 > SPCC188.11 Length=557 Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 22/112 (19%) Query 6 DSMFDARLFNQGGGTDSGYKGGEDDTYNLYDRPLFAQ------RGGAGIYQFSRDRFASS 59 D+M D+RLFNQ G SG++ ++D+YN+YD+P A R GA + SR AS+ Sbjct 444 DTMIDSRLFNQASGLGSGFQ--DEDSYNVYDKPWRAAPSSTLYRPGATL---SRQVDASA 498 Query 60 VGENSELAS-----------FAGADKTRYTRTGPVEFEKDVADPFGLDNLLS 100 E S F G+D+ +R GPV FEKD+ADPFG+D L+ Sbjct 499 ELERITSESRYDVLGNAHKKFKGSDEVVESRAGPVTFEKDIADPFGVDTFLN 550 > At1g77180 Length=613 Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 18/113 (15%) Query 8 MFDARLFNQGGGTDSGYKGGEDDTYNLYDRPLF-AQRGGAGIYQFSRDRFASSVG----- 61 M+D RLFNQ G DSG+ DD YNLYD+ LF AQ + +Y+ +D G Sbjct 458 MYDQRLFNQDKGMDSGF--AADDQYNLYDKGLFTAQPTLSTLYKPKKDNDEEMYGNADEQ 515 Query 62 ----ENSEL----ASFAGA-DKTRYTRTGPVEFEK-DVADPFGLDNLLSEAHK 104 +N+E +F GA ++ R PVEFEK + DPFGL+ +S+ K Sbjct 516 LDKIKNTERFKPDKAFTGASERVGSKRDRPVEFEKEEEQDPFGLEKWVSDLKK 568 > CE06519 Length=535 Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 36/112 (32%) Query 9 FDARLFNQGGGTDSGYKGGEDDTYNLYDRPLFAQRGGAGIYQF----------------- 51 FD RLF++ G DSG +DDTYN YD A RGG + Q Sbjct 412 FDQRLFDKTQGLDSG--AMDDDTYNPYD---AAWRGGDSVQQHVYRPSKNLDNDVYGGDL 466 Query 52 -----SRDRFASSVGENSELASFAGADKTRYTRTGPVEFEKDVADPFGLDNL 98 ++RF + G F+GA+ + +GPV+FEKD D FGL +L Sbjct 467 DKIIEQKNRFVADKG-------FSGAEGSSRG-SGPVQFEKD-QDVFGLSSL 509 > YAL032c Length=379 Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 14/88 (15%) Query 4 QPDSMFDARLFNQGGGTDSGYKGGEDDTYNLYDRPLFAQRGGAGIYQFSRDRFASSVGEN 63 QPD +D+R F +G ++ K ED +YD PLF Q+ IY+ + ++ +V Sbjct 298 QPDLQYDSRFFTRGA--NASAKRHEDQ---VYDNPLFVQQDIESIYKTNYEKLDEAVNVK 352 Query 64 SELASFAGADKTRYTRTGPVEFEKDVAD 91 SE AS + GP++F K +D Sbjct 353 SEGASGSH---------GPIQFTKAESD 371 > CE28289 Length=859 Score = 27.7 bits (60), Expect = 5.9, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query 71 GADKTRYTRTGPVEFEKDVADPFGLDNLLSEAHKSPVE 108 GA YTR P ++ +V++P G +L ++A SP E Sbjct 340 GASYRPYTRLLPTIYDNEVSEPVG--SLFTDARPSPRE 375 > CE28463 Length=1497 Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 9/69 (13%) Query 12 RLFNQ-----GGGTDSGYKGGEDDTYNLYDRPLFAQRGGAGIYQFSRDRFASSVGENSEL 66 RLFN+ G D+ Y +D D P + G+ F+R + S+GE S L Sbjct 900 RLFNEVLHYAGVSNDAKYLTYDDFNALFSDIP---DKQPVGL-PFNRKNYQPSIGETSSL 955 Query 67 ASFAGADKT 75 SFA D++ Sbjct 956 NSFAVVDRS 964 > CE28288 Length=1000 Score = 27.3 bits (59), Expect = 6.6, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query 71 GADKTRYTRTGPVEFEKDVADPFGLDNLLSEAHKSPVE 108 GA YTR P ++ +V++P G +L ++A SP E Sbjct 481 GASYRPYTRLLPTIYDNEVSEPVG--SLFTDARPSPRE 516 > At3g23240 Length=218 Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust. Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 0/28 (0%) Query 35 YDRPLFAQRGGAGIYQFSRDRFASSVGE 62 YD+ F+ RG + I FS +R S+ E Sbjct 122 YDQAAFSMRGSSAILNFSAERVQESLSE 149 Lambda K H 0.314 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1195973986 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40