bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_1663_orf1
Length=92
Score E
Sequences producing significant alignments: (Bits) Value
7295733 115 1e-26
At2g23420 94.4 5e-20
Hs21624643 51.2 4e-07
At4g36940 47.0 8e-06
CE25023 30.0 1.2
CE25084 29.6 1.2
At5g60760 28.5 3.3
At5g02310 27.7 5.0
At2g31520 27.3 6.4
At2g25550 27.3 6.6
> 7295733
Length=541
Score = 115 bits (289), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/91 (56%), Positives = 63/91 (69%), Gaps = 0/91 (0%)
Query 1 LCRHPFQESKRCFVKPKKVEKLLNVWWEKGTITKDLPSLAEIRAHVQTSLNKVRFDMLRL 60
LCRHPFQESKR +V P VE L V+W+ G I + LP+L ++R VQ SL +R D R
Sbjct 450 LCRHPFQESKRAYVIPSHVESLYKVYWKSGKICQQLPTLEQVREKVQISLKTLRNDHKRT 509
Query 61 YNATPYKVSVTDDLYRNTHTLWLENVPIGEL 91
N TPYKV+V+D+LY H LWL+N PIGEL
Sbjct 510 LNPTPYKVAVSDNLYNFIHDLWLQNAPIGEL 540
> At2g23420
Length=574
Score = 94.4 bits (233), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/95 (49%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query 1 LCRHPFQESKRCFVKPKKVEKLLNVWWEKGTITKD---LPSLAEIRAHVQTSLNKVRFDM 57
LCRHPF ESKR +V P++VE+LL +W +G+ + LP L EIR L +R D
Sbjct 481 LCRHPFNESKRAYVVPQRVEELLKCYW-RGSADEAREVLPPLKEIRDRCIKQLENMRPDH 539
Query 58 LRLYNATPYKVSVTDDLYRNTHTLWLENVPIGELQ 92
+R N TPYKVSV+ LY H LWL P+GELQ
Sbjct 540 MRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 574
> Hs21624643
Length=133
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 0/76 (0%)
Query 12 CFVKPKKVEKLLNVWWEKGTITKDLPSLAEIRAHVQTSLNKVRFDMLRLYNATPYKVSVT 71
C V+P +VE LL + ++G + + LPSLAE RA Q SL+++ + RL + Y+V ++
Sbjct 58 CTVRPAQVEPLLRLCLQQGQLCEPLPSLAEYRALAQLSLSRLSPEHRRLRSPAQYQVVLS 117
Query 72 DDLYRNTHTLWLENVP 87
+ L ++L P
Sbjct 118 ERLQALVNSLCAGQSP 133
> At4g36940
Length=458
Score = 47.0 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
Query 1 LCRHPFQESKRCFVKPKKVEKLLNVWW 27
LCRHPF ESKR +V P++VE+LL +W
Sbjct 427 LCRHPFNESKRAYVVPQRVEELLKCYW 453
> CE25023
Length=787
Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query 40 AEIRAHVQTSLNKVRFDMLRLYNATPYKVSVTDDLYRNTHTLWLE 84
A+++AH+ T +N RFD+LR Y+A+ + S T L N+ LE
Sbjct 165 AQLKAHLVTIVNFNRFDLLRNYSASIIQTS-TVALTLNSQKTMLE 208
> CE25084
Length=942
Score = 29.6 bits (65), Expect = 1.2, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query 36 LPSLAEIRAHVQTSLNKVRFDMLRLYNATPYKVSVTDDLYRNTHTLWLENVPIGE 90
+P + H++ S K D++ Y ++ + V DD+ + T TLW + PIGE
Sbjct 564 IPRMTAASKHMKLSAQKTACDVMNRYLSSLF---VLDDVDQITVTLWGDEDPIGE 615
> At5g60760
Length=749
Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query 38 SLAEIRAHVQTSLNKVRFDMLRLYNATPYKVSVTDDLYRNTHT 80
S+A I A V + L + R LY+AT VSV DD YRN T
Sbjct 421 SVAAIHATVFSCLRR-REAGEHLYDATTNTVSVIDDEYRNQCT 462
> At5g02310
Length=795
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query 47 QTSLNKVRFDMLRLYNATPYKVSVTDDLYRNTHTLWLEN 85
Q+ LN V+ ++ +++N P + + D+L R++ +WL++
Sbjct 592 QSELNHVQ-ELEKMFNIPPIDIILNDELLRSSTQIWLQH 629
> At2g31520
Length=1524
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query 12 CFVKPKKVEK-----LLNVWWEKGTITKDLPSLAEIRAHVQTSLNKVRFDMLRLYN 62
CF PK + L+N WWEK + + +P +A R + F L +N
Sbjct 963 CFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFN 1018
> At2g25550
Length=1750
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query 12 CFVKPKKVEK-----LLNVWWEKGTITKDLPSLAEIRAHVQTSLNKVRFDMLRLYN 62
CF PK + L+N WWEK + + +P +A R + F L +N
Sbjct 1189 CFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFN 1244
Lambda K H
0.321 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1171209254
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40