bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2012_orf1
Length=88
Score E
Sequences producing significant alignments: (Bits) Value
Hs4507783 38.1 0.004
CE25632 37.7 0.005
SPBC211.07c 35.8 0.018
At2g46030 35.4 0.029
7290876 35.0 0.034
YEL012w 33.1 0.12
ECU08g0860 33.1 0.14
At1g63800 32.7 0.17
At5g41340 32.3 0.23
At1g60390 29.3 1.9
Hs6005762 28.9 2.2
Hs4758072 28.5 3.6
Hs17472965 28.1 4.3
Hs22042707 27.7 5.6
> Hs4507783
Length=183
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
Query 1 DRRRRKRIIIGFLNKILHPNVDEASG 26
D+ K IGF+NKI HPN+DEASG
Sbjct 59 DKYPFKSPSIGFMNKIFHPNIDEASG 84
> CE25632
Length=241
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
Query 1 DRRRRKRIIIGFLNKILHPNVDEASG 26
D+ K IGFLNKI HPN+DEASG
Sbjct 83 DKYPFKSPSIGFLNKIFHPNIDEASG 108
> SPBC211.07c
Length=184
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query 53 ISSSRK--QCDFAKLLMAGYDLELNNKNTQDFNVVFHG 88
+SS R+ + D KLLM+ Y++ L N N Q+F V FHG
Sbjct 1 MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHG 38
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 6 KRIIIGFLNKILHPNVDEASG 26
K IGF+N+I HPN+DE SG
Sbjct 62 KSPSIGFVNRIFHPNIDELSG 82
> At2g46030
Length=183
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 0/21 (0%)
Query 6 KRIIIGFLNKILHPNVDEASG 26
K +GF+NKI HPNVDE+SG
Sbjct 62 KSPSVGFVNKIYHPNVDESSG 82
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 0/34 (0%)
Query 55 SSRKQCDFAKLLMAGYDLELNNKNTQDFNVVFHG 88
S R++ D KL+M+ Y ++ N + Q F V FHG
Sbjct 5 SKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHG 38
> 7290876
Length=183
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 0/21 (0%)
Query 6 KRIIIGFLNKILHPNVDEASG 26
K IGF+NKI HPN+DE+SG
Sbjct 64 KSPSIGFVNKIYHPNIDESSG 84
> YEL012w
Length=218
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 0/26 (0%)
Query 1 DRRRRKRIIIGFLNKILHPNVDEASG 26
D K IGF+NKI HPN+D ASG
Sbjct 57 DNYPYKSPSIGFVNKIFHPNIDIASG 82
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query 53 ISSSRK--QCDFAKLLMAGYDLELNNKNTQDFNVVFHG 88
+SSS++ + D KLLM+ + ++L N + Q+F+V F G
Sbjct 1 MSSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLG 38
> ECU08g0860
Length=171
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 0/19 (0%)
Query 10 IGFLNKILHPNVDEASGHF 28
IGF +I HPNVDEASG
Sbjct 66 IGFTTRIFHPNVDEASGSI 84
> At1g63800
Length=170
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 0/26 (0%)
Query 1 DRRRRKRIIIGFLNKILHPNVDEASG 26
D K +GF+ KI HPNVDE SG
Sbjct 42 DAYPYKSPSVGFITKIYHPNVDEMSG 67
> At5g41340
Length=187
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 0/26 (0%)
Query 1 DRRRRKRIIIGFLNKILHPNVDEASG 26
D K +GF+ KI HPNVDE SG
Sbjct 57 DAYPYKSPSVGFITKIYHPNVDELSG 82
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 0/34 (0%)
Query 55 SSRKQCDFAKLLMAGYDLELNNKNTQDFNVVFHG 88
S R++ D KL+M+ Y +E N Q+F V F+G
Sbjct 5 SKRREMDMMKLMMSDYKVETINDGMQEFYVEFNG 38
> At1g60390
Length=624
Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 0/35 (0%)
Query 5 RKRIIIGFLNKILHPNVDEASGHFQGLPPYLRFWC 39
+K+++IG +N I +V A Q L PYL ++C
Sbjct 520 KKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYC 554
> Hs6005762
Length=581
Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 10/62 (16%)
Query 14 NKILHPNVDEASGHFQGLPPYLRFWC------FLCQIYLKMTQVQISSS----RKQCDFA 63
N + H N EA+ P + + C FLC +Y M Q+S+ R C+ A
Sbjct 54 NLMGHENQREAAIQLHEFAPLVEYGCHGHLRFFLCSLYAPMCTEQVSTPIPACRVMCEQA 113
Query 64 KL 65
+L
Sbjct 114 RL 115
> Hs4758072
Length=586
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query 4 RRKRIIIGFLNKILHPNVDEASGHFQGLPPYLRFWCFLCQI-YLKMT----QVQISSSRK 58
RK + F ++ N AS GL PYLRF C C++ Y K+T +V+ +SS
Sbjct 226 ERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPP 283
Query 59 QCDFAKLL 66
+ +LL
Sbjct 284 LSLYGQLL 291
> Hs17472965
Length=593
Score = 28.1 bits (61), Expect = 4.3, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 0/16 (0%)
Query 30 GLPPYLRFWCFLCQIY 45
GL PYLRF C C+++
Sbjct 269 GLSPYLRFGCLSCRLF 284
> Hs22042707
Length=559
Score = 27.7 bits (60), Expect = 5.6, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query 30 GLPPYLRFWCFLC----QIYLKMTQVQISSSRKQCDFAKLLMAG 69
G+ L CF+C IY+ T ++I +++ CD+ K L AG
Sbjct 199 GVGACLSISCFICIVISYIYIFSTVLKIPTTKGLCDWVKGLSAG 242
Lambda K H
0.329 0.144 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1184307974
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40