bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2187_orf1
Length=91
Score E
Sequences producing significant alignments: (Bits) Value
SPAC25B8.03 52.4 2e-07
7301094 47.4 6e-06
At4g16700 45.8 2e-05
Hs13489112 45.8 2e-05
CE00834 44.3 6e-05
SPBC16E9.18 42.7 2e-04
At5g57190 42.4 2e-04
At4g25970 36.2 0.013
YNL169c 32.7 0.16
Hs7662034 29.6 1.3
YGR170w 28.9 2.3
> SPAC25B8.03
Length=516
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query 29 LEAYESFGDLFCRTLRDKAREIMDLSPFAMVSPCDCTVSILGTVEGDRVPQVKGATYSLK 88
L Y +F D FCR LR + R + +SP +VSP D + G V+ +R+ VKG +YSL+
Sbjct 127 LTHYRNFQDFFCRELRPETRPVDPVSP--VVSPVDGRIVCQGVVDNNRIQHVKGLSYSLE 184
Query 89 GFL 91
L
Sbjct 185 ALL 187
> 7301094
Length=447
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query 3 IPVSLRPLLMSIFLH-LQPAAADSRYP-LEAYESFGDLFCRTLRDKAREIMDLSPFAMVS 60
+P SLRP + + + +++ YP E Y S + F R L++ R I +P +VS
Sbjct 160 LPPSLRPYVYGWYSNTFDVNLSEAMYPEYEHYNSLAEFFTRPLKEGVRVIDQQAP--LVS 217
Query 61 PCDCTVSILGTVEGDRVPQVKGATYSLKGFL 91
P D V G+ + QVKG +YS++ FL
Sbjct 218 PADGKVLHFGSASDSLIEQVKGVSYSIEDFL 248
> At4g16700
Length=434
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query 3 IPVSLRPLLMSIFLH-LQPAAADSRYPLEAYESFGDLFCRTLRDKAREIMDLSPFAM--- 58
IPV +RP + ++ PLE Y S D F R+L++ R I D P +
Sbjct 148 IPVWMRPYAYKAWARAFHSNLEEAALPLEEYTSLQDFFVRSLKEGCRPI-DPDPCCLFCS 206
Query 59 -------VSPCDCTVSILGTVEGDR--VPQVKGATYSLKGFL 91
VSP D TV G ++G+R + QVKG +YS+ L
Sbjct 207 LRFRRYQVSPVDGTVLRFGELKGNRGMIEQVKGHSYSVPALL 248
> Hs13489112
Length=375
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query 3 IPVSLRPLLMSIFL-----HLQPAAADSRYPLEAYESFGDLFCRTLRDKAREIMDLSPFA 57
+P LR + S+++ +++ AA + L Y + + F R L+ +AR + L +
Sbjct 97 LPHWLRRPVYSLYIWTFGVNMKEAAVED---LHHYRNLSEFFRRKLKPQARPVCGLH--S 151
Query 58 MVSPCDCTVSILGTVEGDRVPQVKGATYSLKGFL 91
++SP D + G V+ V QVKG TYSL+ FL
Sbjct 152 VISPSDGRILNFGQVKNCEVEQVKGVTYSLESFL 185
> CE00834
Length=333
Score = 44.3 bits (103), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query 3 IPVSLRPLLMSIFLHLQPAAADS--RYPLEAYESFGDLFCRTLRDKAREIMDLSPFAMVS 60
IPV LR L+ F + D + Y SF F R L++ R I S +VS
Sbjct 78 IPVWLREHLLGGFARMYDCRMDDCVDPDFKNYPSFAAFFNRKLKESTRPI---SASPLVS 134
Query 61 PCDCTVSILGTVEGDRVPQVKGATYSLKGFL 91
P D TV G VE +++ VKG Y + FL
Sbjct 135 PADGTVLHFGKVEDNKIEYVKGHDYDVDKFL 165
> SPBC16E9.18
Length=203
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query 29 LEAYESFGDLFCRTLRDKAREIMDLSPFAMVSPCDCTVSILGTVEGDRVPQVKGATYSLK 88
+ Y++ + F R L+ AR I +P +V P D + G +EG ++ QVKG TYSL
Sbjct 125 VRQYKNLAEFFTRKLKPGARVIDPDAP--IVIPADGKILNYGVIEGGQLEQVKGITYSLD 182
Query 89 GFL 91
L
Sbjct 183 ALL 185
> At5g57190
Length=615
Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query 15 FLHLQPAAADSRYPLEAYESFGDLFCRTLRDKAREI--MDLSPFAMVSPCDCTVSILGTV 72
F Q A+ +YPL+ +++F + F R L+ AR I M+ + A V DC + +V
Sbjct 374 FFKDQINMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRNDVA-VCAADCRLMAFQSV 432
Query 73 EGDRVPQVKGATYSLKGFL 91
E +KG +S++G L
Sbjct 433 EDSTRFWIKGKKFSIRGLL 451
> At4g25970
Length=628
Score = 36.2 bits (82), Expect = 0.013, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query 15 FLHLQPAAADSRYPLEAY-------------ESFGDLFCRTLRDKAREI--MDLSPFAMV 59
F Q A+ +YPL+ + ++F + F R L+ AR I MD A V
Sbjct 373 FFKDQINMAEVKYPLDHFKVRKGNSWWSFYLQTFNEFFVRELKPGARPIACMDQDDVA-V 431
Query 60 SPCDCTVSILGTVEGDRVPQVKGATYSLKGFL 91
S DC + +V+ +KG +S+KG L
Sbjct 432 SAADCRLMAFQSVDDSTRFWIKGRKFSIKGLL 463
> YNL169c
Length=500
Score = 32.7 bits (73), Expect = 0.16, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query 3 IPVSLRPLLMSIFLHLQPAAADSRYP--LEAYESFGDLFCRTLRDKAREIMDLSPFAMVS 60
+P+ +RP ++ L D L Y + + F R ++ R + + S
Sbjct 149 LPIWVRPWGYRLYSFLFGVNLDEMEDPDLTHYANLSEFFYRNIKPGTRPVAQ-GEDVIAS 207
Query 61 PCDCTVSILGTV--EGDRVPQVKGATYSLKGFL 91
P D + +G + E + QVKG TYS+K FL
Sbjct 208 PSDGKILQVGIINSETGEIEQVKGMTYSIKEFL 240
> Hs7662034
Length=907
Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query 34 SFGDLFCRTLRDKAREIM------DLSPFAMVSPCDCTVSILG 70
SF D FC + AR+ M D SPF + P + S+LG
Sbjct 685 SFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPDETGKSVLG 727
> YGR170w
Length=1138
Score = 28.9 bits (63), Expect = 2.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 0/57 (0%)
Query 32 YESFGDLFCRTLRDKAREIMDLSPFAMVSPCDCTVSILGTVEGDRVPQVKGATYSLK 88
+++F + F R L+ +R + + SP D ++ T++ + VKG +S+K
Sbjct 868 FKTFNEFFYRKLKPGSRLPESNNKEILFSPADSRCTVFPTIQESKEIWVKGRKFSIK 924
Lambda K H
0.326 0.140 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1174483934
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40