bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2372_orf1 Length=60 Score E Sequences producing significant alignments: (Bits) Value YIL109c 45.1 3e-05 At3g07100 45.1 3e-05 Hs5454046 42.0 3e-04 At3g44340 41.6 3e-04 CE24707 40.8 7e-04 YNL049c 38.1 0.004 SPBC4.03c 37.0 0.009 Hs22049400 36.6 0.010 At4g32640 36.6 0.012 SPCC31H12.07 35.8 0.021 SPAC22F8.08 35.0 0.034 7303833 30.0 1.1 YHR098c 29.3 1.7 YPR181c 29.3 1.8 At1g20110 28.9 2.4 ECU02g1230 27.3 7.0 > YIL109c Length=926 Score = 45.1 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 0/60 (0%) Query 1 KEAILNTLNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVLRR 60 ++ I L IP I++SN T+ LG A++SA + VGGKI++ + + P +G G L+R Sbjct 400 RQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGGVGGKIIVVSGTLPNLGIGKLQR 459 > At3g07100 Length=1054 Score = 45.1 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 0/52 (0%) Query 8 LNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVLR 59 L+++P +++ N ++ G A+R+A MV +GGK+L+F +S P++G G L+ Sbjct 539 LDSLPLMFQDNFNVESAFGPALRAAFMVMNQLGGKLLIFQNSLPSLGAGRLK 590 > Hs5454046 Length=1268 Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 1 KEAILNTLNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVLR 59 KE I + LNA+P+++ + T + LG A+++A + GG++ +F + P++G G+L+ Sbjct 766 KELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQ 824 > At3g44340 Length=1122 Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 0/51 (0%) Query 8 LNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVL 58 L +IP +++ + ++ G+AV++A + K GGK+++F S P+VG G L Sbjct 614 LESIPTMFQESKSPESAFGAAVKAAFLAMKSTGGKLMVFQSVLPSVGIGAL 664 > CE24707 Length=1024 Score = 40.8 bits (94), Expect = 7e-04, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query 1 KEAILNTLNAIPDIWKSNACTDN--CLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVL 58 K+ I + +P+ + T N CLGSA++ A + + VGG+I +F S P +G G L Sbjct 494 KDTIRTFIKQLPEFYSQIGPTSNGNCLGSALKLAQSMIQEVGGRISIFQVSLPNLGLGAL 553 Query 59 R 59 + Sbjct 554 K 554 > YNL049c Length=876 Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 0/60 (0%) Query 1 KEAILNTLNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVLRR 60 K + L IP+I++ + LG A+++A+ + K GGK+ + +S+ P G G L++ Sbjct 356 KNNLETLLKKIPEIFQDTHSSKFALGPALKAASNLIKSTGGKVEVISSTLPNTGIGKLKK 415 > SPBC4.03c Length=891 Score = 37.0 bits (84), Expect = 0.009, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 1 KEAILNTLNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVLR 59 K I L++ P I++ + +G+A+ ++ K GGK +F S+ PT+G G LR Sbjct 381 KVVIERLLDSFPAIFQDVKIPEPVVGNALEVVKLLLKETGGKAFVFVSALPTMGLGKLR 439 > Hs22049400 Length=1093 Score = 36.6 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 0/59 (0%) Query 1 KEAILNTLNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVLR 59 KE + + L +P ++ T + LG A+++A + GG++ +F + PT+G G L+ Sbjct 592 KELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALK 650 > At4g32640 Length=1069 Score = 36.6 bits (83), Expect = 0.012, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 0/51 (0%) Query 8 LNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVL 58 L++IP +++ + ++ G+AV++A + K GGK+++F S +VG G L Sbjct 600 LDSIPTMFQESKIPESAFGAAVKAAFLAMKSKGGKLMVFQSILCSVGVGAL 650 > SPCC31H12.07 Length=759 Score = 35.8 bits (81), Expect = 0.021, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Query 12 PDIW------KSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVL 58 PD W + CT L +V V + GG I+LFA P TVG G + Sbjct 245 PDSWPVANDRRPQRCTGTALNISVSMMESVCPNSGGHIMLFAGGPSTVGPGTV 297 > SPAC22F8.08 Length=926 Score = 35.0 bits (79), Expect = 0.034, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 0/58 (0%) Query 1 KEAILNTLNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVL 58 ++ I N L ++ + + N LG +++A + +++GGKI SS P VG G L Sbjct 419 RQGIENLLERFQSMFATTRDSSNALGPGLKAAHRLIENIGGKICCLISSLPNVGVGKL 476 > 7303833 Length=1184 Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 0/58 (0%) Query 1 KEAILNTLNAIPDIWKSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEGVL 58 KE + + L +P + + LG+A++ A + + GG+I +F S P G G L Sbjct 673 KELVRDLLKQLPKRFAHTHDPGSALGAALQVAFKLMQASGGRITVFQSCLPNKGPGAL 730 > YHR098c Length=929 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%) Query 24 CLGSAVRSAAMVAKHV----GGKILLFASSPPTVGEGVL 58 C GSA+++A + V GGKI+ +S PT+G G L Sbjct 412 CYGSALQAAKLALDTVTGGQGGKIICSLNSLPTIGNGNL 450 > YPR181c Length=768 Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 8/65 (12%) Query 2 EAILNTL--NAIPDIWKSNACTD--NCLGSAVRSAAMVA----KHVGGKILLFASSPPTV 53 E LN L N PD W A GSA+ A+++ K++ +I+LFAS P TV Sbjct 235 EFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTV 294 Query 54 GEGVL 58 G++ Sbjct 295 APGLI 299 > At1g20110 Length=613 Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query 16 KSNACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGE 55 +SN+ T N L V +A AK +GG +S PPT G+ Sbjct 389 QSNSYTTNTLLDTVTAAMFQAKEIGG-----SSRPPTSGK 423 > ECU02g1230 Length=705 Score = 27.3 bits (59), Expect = 7.0, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 0/39 (0%) Query 18 NACTDNCLGSAVRSAAMVAKHVGGKILLFASSPPTVGEG 56 N T N G A+R + GG I+ F ++ P +G G Sbjct 258 NKSTKNNYGDALRVVQSILGATGGCIISFLATHPNMGSG 296 Lambda K H 0.318 0.132 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1181901402 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40