bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2374_orf1 Length=114 Score E Sequences producing significant alignments: (Bits) Value YEL031w 52.0 3e-07 SPACUNK4.07c 52.0 3e-07 7297823 42.7 2e-04 ECU02g0330 42.4 2e-04 At5g23630 42.4 2e-04 Hs9966897 38.9 0.002 CE08059 38.5 0.003 > YEL031w Length=1215 Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLL 60 E+ F P +NT F + L +STF NY+G P+ + N + LL L L Sbjct 1093 EKEFAPSLLNTGIFIIQLVQQVSTFAVNYQGEPFRENIRSNKGMYYGLLGVTGLALASAT 1152 Query 61 QLLPFLNEILDLVLFHDADFLLQLQLLVAADLLGPWLV 98 + LP LNE + V D DF ++L L + D G W V Sbjct 1153 EFLPELNEAMKFVPMTD-DFKIKLTLTLLLDFFGSWGV 1189 > SPACUNK4.07c Length=1211 Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLL 60 EE FKP +NTA + L L +STF NY+G P+ L +N + LL + + + Sbjct 1095 EETFKPSLLNTAIYLLQLIQQVSTFAINYQGRPFREALSENKGMYYGLLGIAFVAIAGVT 1154 Query 61 QLLPFLNEILDLVLFHDADFLLQLQLLVAADLLGPWLVAATCRK 104 + P LN L LV +F +QL + D W++ +K Sbjct 1155 EFSPELNAKLQLVKMA-YNFQIQLLATMVVDYAACWIIEELMKK 1197 > 7297823 Length=1225 Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query 4 FKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLLQLL 63 + P+ V++ + + L++ ++T NY+G P+ L N L + + L+++L L Sbjct 1112 YDPNIVSSTVYIICLSLQVATIAVNYKGYPFMESLRSNRMLMYAIGASAALVILLSTGLA 1171 Query 64 PFLNEILDLVLFHDADFLLQLQLLVAADLLGPWLVAATC 102 P L E +++ F DF L ++ D++G +L+ C Sbjct 1172 PELTEFFEIIDF-PTDFRKTLLGVLVLDIVGAFLLDRIC 1209 > ECU02g0330 Length=973 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 0/42 (0%) Query 2 EAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNAR 43 E F P +N+A F+L +STFL NY G P+ LL+N + Sbjct 869 EKFSPSLMNSALFFLSTTQQISTFLVNYIGRPFRESLLENKK 910 > At5g23630 Length=1179 Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 0/73 (0%) Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLL 60 + +F P+ VNT ++ + + + ++TF NY G P+++ + +N L++G V+ Sbjct 1051 DASFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSIRENKPFFYALIAGAGFFTVIAS 1110 Query 61 QLLPFLNEILDLV 73 L LN+ L LV Sbjct 1111 DLFRDLNDSLKLV 1123 > Hs9966897 Length=1086 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 0/43 (0%) Query 2 EAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARL 44 + F+P VN+ + + +AM M+TF NY+G P+ L +N L Sbjct 974 KEFEPSLVNSTVYIMAMAMQMATFAINYKGPPFMESLPENKPL 1016 > CE08059 Length=1157 Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 16/94 (17%) Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQN-ARLGKMLLSGLVLLLVLL 59 E F P+ +NT + + +A+ + TF NY G P+ L +N A L ++ SG Sbjct 1049 EAKFTPNILNTTVYIISMALQVCTFAVNYRGRPFMESLFENKAMLYSIMFSG-------- 1100 Query 60 LQLLPFLNEILDLVLFHDADFLLQLQLLVAADLL 93 + L D ++Q +L+V + L Sbjct 1101 -------GAVFTLASGQATDLMIQFELVVLPEAL 1127 Lambda K H 0.328 0.142 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1181971906 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40