bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2374_orf1
Length=114
Score E
Sequences producing significant alignments: (Bits) Value
YEL031w 52.0 3e-07
SPACUNK4.07c 52.0 3e-07
7297823 42.7 2e-04
ECU02g0330 42.4 2e-04
At5g23630 42.4 2e-04
Hs9966897 38.9 0.002
CE08059 38.5 0.003
> YEL031w
Length=1215
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLL 60
E+ F P +NT F + L +STF NY+G P+ + N + LL L L
Sbjct 1093 EKEFAPSLLNTGIFIIQLVQQVSTFAVNYQGEPFRENIRSNKGMYYGLLGVTGLALASAT 1152
Query 61 QLLPFLNEILDLVLFHDADFLLQLQLLVAADLLGPWLV 98
+ LP LNE + V D DF ++L L + D G W V
Sbjct 1153 EFLPELNEAMKFVPMTD-DFKIKLTLTLLLDFFGSWGV 1189
> SPACUNK4.07c
Length=1211
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLL 60
EE FKP +NTA + L L +STF NY+G P+ L +N + LL + + +
Sbjct 1095 EETFKPSLLNTAIYLLQLIQQVSTFAINYQGRPFREALSENKGMYYGLLGIAFVAIAGVT 1154
Query 61 QLLPFLNEILDLVLFHDADFLLQLQLLVAADLLGPWLVAATCRK 104
+ P LN L LV +F +QL + D W++ +K
Sbjct 1155 EFSPELNAKLQLVKMA-YNFQIQLLATMVVDYAACWIIEELMKK 1197
> 7297823
Length=1225
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query 4 FKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLLQLL 63
+ P+ V++ + + L++ ++T NY+G P+ L N L + + L+++L L
Sbjct 1112 YDPNIVSSTVYIICLSLQVATIAVNYKGYPFMESLRSNRMLMYAIGASAALVILLSTGLA 1171
Query 64 PFLNEILDLVLFHDADFLLQLQLLVAADLLGPWLVAATC 102
P L E +++ F DF L ++ D++G +L+ C
Sbjct 1172 PELTEFFEIIDF-PTDFRKTLLGVLVLDIVGAFLLDRIC 1209
> ECU02g0330
Length=973
Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 0/42 (0%)
Query 2 EAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNAR 43
E F P +N+A F+L +STFL NY G P+ LL+N +
Sbjct 869 EKFSPSLMNSALFFLSTTQQISTFLVNYIGRPFRESLLENKK 910
> At5g23630
Length=1179
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 0/73 (0%)
Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLL 60
+ +F P+ VNT ++ + + + ++TF NY G P+++ + +N L++G V+
Sbjct 1051 DASFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSIRENKPFFYALIAGAGFFTVIAS 1110
Query 61 QLLPFLNEILDLV 73
L LN+ L LV
Sbjct 1111 DLFRDLNDSLKLV 1123
> Hs9966897
Length=1086
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 0/43 (0%)
Query 2 EAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARL 44
+ F+P VN+ + + +AM M+TF NY+G P+ L +N L
Sbjct 974 KEFEPSLVNSTVYIMAMAMQMATFAINYKGPPFMESLPENKPL 1016
> CE08059
Length=1157
Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 16/94 (17%)
Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQN-ARLGKMLLSGLVLLLVLL 59
E F P+ +NT + + +A+ + TF NY G P+ L +N A L ++ SG
Sbjct 1049 EAKFTPNILNTTVYIISMALQVCTFAVNYRGRPFMESLFENKAMLYSIMFSG-------- 1100
Query 60 LQLLPFLNEILDLVLFHDADFLLQLQLLVAADLL 93
+ L D ++Q +L+V + L
Sbjct 1101 -------GAVFTLASGQATDLMIQFELVVLPEAL 1127
Lambda K H
0.328 0.142 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181971906
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40