bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2622_orf1
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
7288911 174 5e-44
CE08425 150 1e-36
Hs21361863 79.7 2e-15
HsM14916441 79.0 3e-15
Hs5803153_1 74.3 7e-14
Hs16507962 36.2 0.023
7302315 31.2 0.81
CE06413 31.2 0.88
At1g60020 29.6 2.1
Hs17482134 28.9 4.2
SPBC32H8.13c 27.7 8.2
> 7288911
Length=1194
Score = 174 bits (441), Expect = 5e-44, Method: Composition-based stats.
Identities = 85/169 (50%), Positives = 113/169 (66%), Gaps = 20/169 (11%)
Query 1 GDGWDMMLRHPAKKKLTANRYWKKIFVRFI--PETCMLQLYNKKEDPQPFQELPLQASYS 58
G GW+M LR P KKK+T R+WKKI VR + + ++QL N+ D QPFQELPLQ SYS
Sbjct 655 GPGWEMQLRQPNKKKITGQRFWKKIVVRLVVQNDVPVVQLLNQAGDKQPFQELPLQPSYS 714
Query 59 LSEISAQQYDQYGKIFTIKVQYIFYRERVGVRPGQIAKV------------------MQG 100
+SEI AQQYDQ+GKIFT+K+QYIFY+ER GVRPGQ+ K +G
Sbjct 715 VSEIGAQQYDQFGKIFTMKLQYIFYKERPGVRPGQVTKAERITNKLTKFAQYAIAGDYEG 774
Query 101 QIQSMGDFARLGMPVEHAPQVSELLKIGTLDYLTLKEMVTVVEEAMFRM 149
+ D +LG+PVEHAPQ S+L KIG+++Y +K+ +EEA+F++
Sbjct 775 VKEFGSDLKKLGLPVEHAPQSSQLFKIGSMNYEDMKQFSVCIEEALFKI 823
> CE08425
Length=1657
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 103/152 (67%), Gaps = 9/152 (5%)
Query 1 GDGWDMMLRHPAKKK-LTANRYWKKIFVRFIPETCMLQLYNKKEDPQPFQELPLQASYSL 59
GDGWD+M+RHP KKK A R WK +VR L LYN K+D QP QEL LQA+YSL
Sbjct 1098 GDGWDLMVRHPIKKKSFMAERCWKPCYVRL--HGLTLYLYNDKKDAQPIQELLLQATYSL 1155
Query 60 SEISAQQYDQYGKIFTIKVQYIFYRERVGVRPGQIAKVMQGQIQSMGDFARLGMPVEHAP 119
S+ + Q YD YGKI T+K+Q++ Y+E+VG+RPGQI++++ G I + G+P+EH+
Sbjct 1156 SDTTLQAYDVYGKIHTVKLQFVVYKEKVGIRPGQISRLVDGHI------TKYGLPLEHSA 1209
Query 120 QVSELLKIGTLDYLTLKEMVTVVEEAMFRMNV 151
Q + LLK G+L+ L+ VT VE+ +F+ +
Sbjct 1210 QCTVLLKFGSLNASHLQTFVTTVEDLLFKCKI 1241
> Hs21361863
Length=905
Score = 79.7 bits (195), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 21/150 (14%)
Query 2 DGWDMMLRHPAKKKLTANRYWKKIFVRFIPETCMLQLYNKKEDPQPFQELPLQASYSLSE 61
DGW MMLR P KK + ++R+W IFV+ + +T LQLY ++ +PF+E L+ + +SE
Sbjct 426 DGWPMMLRIPEKKNIMSSRHWGPIFVK-LTDTGYLQLYYEQGLEKPFREFKLEICHEISE 484
Query 62 ISAQQYDQYGKIFTIKVQYIFYRERVGVRPGQIAKVMQGQIQSMGDFARLGMPVEHAPQV 121
Q YD+ G+I ++++ + Y+E+ +P V H +
Sbjct 485 PRLQNYDENGRIHSLRIDRVTYKEKKKYQPKP--------------------AVAHTAER 524
Query 122 SELLKIGTLDYLTLKEMVTVVEEAMFRMNV 151
+++K+GT +Y + V++ + + V
Sbjct 525 EQVIKLGTTNYDDFLSFIHAVQDRLMDLPV 554
> HsM14916441
Length=702
Score = 79.0 bits (193), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 21/150 (14%)
Query 2 DGWDMMLRHPAKKKLTANRYWKKIFVRFIPETCMLQLYNKKEDPQPFQELPLQASYSLSE 61
DGW MMLR P KK + ++R+W IFV+ + +T LQLY ++ +PF+E L+ + +SE
Sbjct 223 DGWPMMLRIPEKKNIMSSRHWGPIFVK-LTDTGYLQLYYEQGLEKPFREFKLEICHEISE 281
Query 62 ISAQQYDQYGKIFTIKVQYIFYRERVGVRPGQIAKVMQGQIQSMGDFARLGMPVEHAPQV 121
Q YD+ G+I ++++ + Y+E+ +P V H +
Sbjct 282 PRLQNYDENGRIHSLRIDRVTYKEKKKYQPKP--------------------AVAHTAER 321
Query 122 SELLKIGTLDYLTLKEMVTVVEEAMFRMNV 151
+++K+GT +Y + V++ + + V
Sbjct 322 EQVIKLGTTNYDDFLSFIHAVQDRLMDLPV 351
> Hs5803153_1
Length=708
Score = 74.3 bits (181), Expect = 7e-14, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 21/147 (14%)
Query 3 GWDMMLRHPAKKKLTANRYWKKIFVRFIPETCMLQLYNKKEDPQPFQELPLQASYSLSEI 62
GW MLR P KK + ++R W IF++ +P +LQ+Y ++ +PF+E+ L LSE
Sbjct 275 GWSFMLRIPEKKNMMSSRQWGPIFLKVLPGG-ILQMYYEQGLEKPFKEIQLDPYCRLSEP 333
Query 63 SAQQYDQYGKIFTIKVQYIFYRERVGVRPGQIAKVMQGQIQSMGDFARLGMPVEHAPQVS 122
+ + GKI T+K++++ Y E+ + + + V H P +
Sbjct 334 KVENFSVAGKIHTVKIEHVSYTEK---------RKYHSKTE-----------VVHEPDIE 373
Query 123 ELLKIGTLDYLTLKEMVTVVEEAMFRM 149
++LK+G+ Y + +T VEE + ++
Sbjct 374 QMLKLGSTSYHDFLDFLTTVEEELMKL 400
> Hs16507962
Length=3354
Score = 36.2 bits (82), Expect = 0.023, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query 77 KVQYIFYRERVGVRPGQIAKVMQGQIQSMGDFARLGMPVEHAPQVSELLKIGTLDYLTLK 136
+ Q F RE V+P + ++ IQ + A+LG + P LLK+ DYL LK
Sbjct 3168 RTQGTFGREPAAVKPDD-DRYLRAAIQEYDNIAKLGQIIREGPIKGSLLKVVLEDYLRLK 3226
Query 137 EM 138
++
Sbjct 3227 KL 3228
> 7302315
Length=431
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query 55 ASYSLSEISAQQYDQYGKIFTIKVQYIFYRERVGVRPGQIAKVMQGQIQSMGDFARLGMP 114
A ++++ + Q++ + +F+I V Y + G +PG+ IQ+ ARLG
Sbjct 36 ADVTMADAAHQEFARRLALFSINV----YGKLSGQKPGENIVFSPFSIQTCAAMARLGAE 91
Query 115 VEHAPQVSELLKIGTLD 131
E A Q+ + L + + D
Sbjct 92 NETATQLDQGLGLASSD 108
> CE06413
Length=444
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query 10 HPAKKK-LTANRYWKKIFVRFIPETCML-QLYNKKEDPQPFQELPLQASYSLSEISAQQY 67
HP K + L+ NR W F F+ TC QLY + + P Q + Y L+ + +Y
Sbjct 143 HPTKNRWLSRNRMWIAAFAIFLGTTCKFSQLYEMEIEYLP-QCMGTMREYQLNLSALARY 201
Query 68 DQYG 71
+ YG
Sbjct 202 EIYG 205
> At1g60020
Length=1194
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 0/48 (0%)
Query 94 IAKVMQGQIQSMGDFARLGMPVEHAPQVSELLKIGTLDYLTLKEMVTV 141
I + QG + A LG P+EHA Q+ LL + DY ++ + +
Sbjct 147 ITEYFQGHTTRFDELALLGKPLEHAEQIEFLLGGLSEDYKSVVDQTEI 194
> Hs17482134
Length=185
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query 58 SLSEISAQQYDQYGKIFTIKVQYIFYRERVGVRPGQIAKVMQGQIQSMGDFARLGMPVEH 117
S E+ + + G+I + + RE +RP ++ V+ QI + RLG +EH
Sbjct 29 SGKEVYVDEDSESGEIKNQSEELLLGREEKALRPSSVSPVV--QIYKL----RLGEGIEH 82
Query 118 APQVSELLKIG---TLDYLTLKEMVTVVEEAM 146
A +E + + T + TL E++ V + +
Sbjct 83 AQGATEPILLNFWTTRGHTTLSEVLVSVNDKL 114
> SPBC32H8.13c
Length=2352
Score = 27.7 bits (60), Expect = 8.2, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 0/55 (0%)
Query 37 QLYNKKEDPQPFQELPLQASYSLSEISAQQYDQYGKIFTIKVQYIFYRERVGVRP 91
Q Y + +E+PL + S+ + D+YG + KV + Y++ V RP
Sbjct 1780 QSYEGDSNDFGIREVPLSDANQSSQADSTSIDRYGPYSSQKVNFSKYKDFVESRP 1834
Lambda K H
0.323 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1925034518
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40