bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2644_orf1
Length=94
Score E
Sequences producing significant alignments: (Bits) Value
CE01477 45.4 3e-05
7294928 41.6 3e-04
At1g65650 41.2 5e-04
At5g16310 39.7 0.001
7292743 37.0 0.010
Hs7706753 33.1 0.13
SPBC409.06 31.2 0.47
7302976 28.5 3.2
At3g24360 27.3 7.8
> CE01477
Length=326
Score = 45.4 bits (106), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query 2 AEEAKQLEEARQAALSKIEVLEELKALEQAKRAEWDRENARRRHDFTPFVLCALRHLARK 61
A E +LEE +I L + A E K + +EN RRRH++TPFV+ ++ LA++
Sbjct 241 ANENNELEE-------QIADLNKAIADEDYKMEMYRKENNRRRHNYTPFVIELMKILAKE 293
Query 62 GELVKAVRRATAAA 75
G+LV V A AA
Sbjct 294 GKLVGLVDNAYQAA 307
> 7294928
Length=324
Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query 2 AEEAKQLEEARQAALSKIEVLEELKALEQAKRAEWDRENARRRHDFTPFVLCALRHLARK 61
A A EE RQA +S + E E K+ + EN RR+H++ PF++ L+ L
Sbjct 241 APNAMDTEEDRQAEISSLRTYIEY---EIQKKKRYKVENVRRKHNYLPFIVELLKILGEN 297
Query 62 GELVKAVRRATAAA 75
G+L+ +A A
Sbjct 298 GQLMPIYEKAKQRA 311
> At1g65650
Length=330
Score = 41.2 bits (95), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 0/64 (0%)
Query 17 SKIEVLEELKALEQAKRAEWDRENARRRHDFTPFVLCALRHLARKGELVKAVRRATAAAA 76
S IE + +E+ K +W EN RR+H++ PF+ L+ LA K +L + +A
Sbjct 267 SGIEAASDKIVMEEEKFMKWRTENIRRKHNYIPFLFNFLKLLAEKKQLKPLIEKAKKQKT 326
Query 77 ATAT 80
++T
Sbjct 327 ESST 330
> At5g16310
Length=334
Score = 39.7 bits (91), Expect = 0.001, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 0/46 (0%)
Query 19 IEVLEELKALEQAKRAEWDRENARRRHDFTPFVLCALRHLARKGEL 64
IE + + +E+ K W +EN RR+H++ PF+ L+ LA K +L
Sbjct 280 IETVSQKIVMEEEKSKNWKKENMRRKHNYVPFLFNFLKILADKKKL 325
> 7292743
Length=340
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 0/43 (0%)
Query 29 EQAKRAEWDRENARRRHDFTPFVLCALRHLARKGELVKAVRRA 71
E+ K+ + +EN RRRH++ PF++ L+ L G+L+ +A
Sbjct 279 EKEKKRRYRKENIRRRHNYLPFIVELLKQLGETGQLMAICDKA 321
> Hs7706753
Length=329
Score = 33.1 bits (74), Expect = 0.13, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query 3 EEAKQLEEARQAALSKIEVLEELKALEQAKRAEWDRENARRRHDFTPFVLCALRHLARKG 62
++ + A Q+ ++K ++L E + +++ KR + EN RR+H++ PF++ L+ LA
Sbjct 251 DQGNSMLSAIQSEVAKNQMLIE-EEVQKLKR--YKIENIRRKHNYLPFIMELLKTLAEHQ 307
Query 63 ELVKAVRRA 71
+L+ V +A
Sbjct 308 QLIPLVEKA 316
> SPBC409.06
Length=300
Score = 31.2 bits (69), Expect = 0.47, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query 9 EEARQAALSKIEVLEELKA----LEQAKRAEWDRENARRRHDF 47
++ + + L++ ++ +E KA +E KR W REN RRH+F
Sbjct 220 KDKKASLLTREDLTDEEKAASIAVEDEKRLRWKRENQLRRHNF 262
> 7302976
Length=471
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query 5 AKQLEEARQAALSKIEVLEELKALEQAKRAEWDRENARRRHDFTPFVLCALRHLARKGEL 64
A+ L+ + ++I + E+ A E +R + + +RR H++ F+ L LA +G L
Sbjct 334 ARDLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVL 393
Query 65 VKAV-------RRATAAAAAT----ATAAAAAGGS 88
+ V ++ + AA + A+AGGS
Sbjct 394 GELVSQHLLPSKKVSGQGAANRISKQSTTASAGGS 428
> At3g24360
Length=380
Score = 27.3 bits (59), Expect = 7.8, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query 7 QLEEARQAALSKIEVLEELKALEQ---AKRAEWDRENARRRHDFTPFVL 52
Q+E A + S E +EELK +Q A AEW E + PF L
Sbjct 242 QIESAFSVSKSVKETIEELKKFQQSSEASVAEWANEAVQGIEKGAPFSL 290
Lambda K H
0.313 0.122 0.325
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1164659894
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40