bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Emax_2881_orf2
Length=62
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  At3g16090                                                           37.7    0.005
  Hs22062486                                                          32.3    0.21
  7302095                                                             31.2    0.50
  SPBC17D11.02c                                                       30.4    0.75
  SPCC4B3.04c                                                         29.6    1.3
  At1g08800                                                           29.6    1.4


> At3g16090
Length=492

 Score = 37.7 bits (86),  Expect = 0.005, Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 0/50 (0%)

Query  7   EFYTAVVKLASNKLALAIEYNFCLLMFLLFVKFILHLLVGRLRRLEVEQV  56
           +FY A V L+++K++L +  N CL++ L     +  + +G LR  EVE++
Sbjct  28  QFYPATVYLSTSKISLVLLLNMCLVLMLSLWHLVKFVFLGSLREAEVERL  77


> Hs22062486
Length=617

 Score = 32.3 bits (72),  Expect = 0.21, Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 0/57 (0%)

Query  2   YLFNDEFYTAVVKLASNKLALAIEYNFCLLMFLLFVKFILHLLVGRLRRLEVEQVLD  58
           Y    +FY  VV L  +  ++A+ Y    ++  L  K +  +  G+LR  E+E +L+
Sbjct  23  YYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLE  79


>
Length=621

 Score = 31.2 bits (69),  Expect = 0.50, Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 0/57 (0%)

Query  2   YLFNDEFYTAVVKLASNKLALAIEYNFCLLMFLLFVKFILHLLVGRLRRLEVEQVLD  58
           Y    +FY AVV +  +  ++ + Y    ++  +F K +  + +G LR  E E +L+
Sbjct  12  YYQKQQFYPAVVYITKSNASMGVIYIQFFVIVFMFGKLLSKIFLGTLRAAEFEHLLE  68


> SPBC17D11.02c
Length=677

 Score = 30.4 bits (67),  Expect = 0.75, Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 0/46 (0%)

Query  9   YTAVVKLASNKLALAIEYNFCLLMFLLFVKFILHLLVGRLRRLEVE  54
           Y+A V ++ + + + I  N CL +F      +  LL G L+  E+E
Sbjct  29  YSATVMISQSPVHITIGLNVCLCLFFAIANALKTLLFGSLQTFELE  74


> SPCC4B3.04c
Length=1316

 Score = 29.6 bits (65),  Expect = 1.3, Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query  3   LFNDEFYTAVVKLASNKL---ALAIEYNFCLLMFLLFVKFILHLLVGRLRRL  51
           LF   F T  V   + K+   +L I++NF  L+FL FV   + +LV R R L
Sbjct  36  LFLLSFATITVPKWAYKIVTYSLTIQFNFKSLLFLFFVSICVVILVVRYRYL  87


> At1g08800
Length=1110

 Score = 29.6 bits (65),  Expect = 1.4, Method: Composition-based stats.
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)

Query  21  ALAIEYNFCLLMFLLFVKFILHLLVGRL  48
           ALA+ +N  LLMF+LFV  I   ++ R 
Sbjct  9   ALALAFNEWLLMFMLFVNSIFSYVIARF  36



Lambda     K      H
   0.335    0.151    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1175803722


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40