bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2910_orf1 Length=176 Score E Sequences producing significant alignments: (Bits) Value CE27372 54.7 9e-08 7297892 53.5 2e-07 At5g16780 52.0 6e-07 Hs10863889 48.9 5e-06 At3g14700 40.8 0.001 YOR308c 39.7 0.003 CE01257 33.5 0.21 SPAC167.03c 33.1 0.28 > CE27372 Length=829 Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 2/81 (2%) Query 98 EVNIDYRDAFGNVMTAKDAFRRISWHFHGKFPSLRKQEKKI-KKLELERRLQENIMDC-L 155 +VNI Y D G M AKDA+R +S+ FHG+ P ++ EK+ +K + ER L+ N D L Sbjct 738 DVNISYVDRKGREMDAKDAYRELSYKFHGRNPGKKQLEKRANRKDKEERMLKTNSYDTPL 797 Query 156 PTLKALKKVQEGESSAHLVLT 176 TL +K Q+ S+ +LVL+ Sbjct 798 GTLDKQRKKQKQLSTPYLVLS 818 > 7297892 Length=964 Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 26/132 (19%) Query 64 LQYLQSKDFFSLDK-------IRRRRGHHLEQPLHNADNDKE-----VNIDYRDAFGNVM 111 + +LQ+K++ DK + RR H P+ + DKE V +DY D G ++ Sbjct 822 MAHLQAKNYSIEDKAAGEDEKVGRRDRFHF-GPITDF-KDKETFKPNVKLDYIDDNGRIL 879 Query 112 TAKDAFRRISWHFHGKFPSLRKQEKKIKKLELERRLQENIMDC-------LPTLKALKKV 164 K+AFR +S FHGK P K EK++KK+E Q+ +M L TL L++ Sbjct 880 NLKEAFRYLSHKFHGKGPGKNKIEKRLKKME-----QDGLMKTMSSTDTPLGTLTMLQQK 934 Query 165 QEGESSAHLVLT 176 Q+ +A++VL+ Sbjct 935 QKETKTAYVVLS 946 > At5g16780 Length=820 Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 18/146 (12%) Query 49 EFMAEQPIGDSVSGALQYLQSKDFF---------SLDKIRRR-------RGHHLEQPLHN 92 E + E +G +SGAL+ L+ + ++DK + + G + + Sbjct 616 ENIHEVAVGKGLSGALKLLKDRGTLKEKVEWGGRNMDKKKSKLVGIVDDDGGKESKDKES 675 Query 93 ADNDKEVNIDYRDAFGNVMTAKDAFRRISWHFHGKFPSLRKQEKKIKKLELERRLQENIM 152 D K++ I+ D FG +T K+AFR +S FHGK P K+EK++K+ + E +L++ Sbjct 676 KDRFKDIRIERTDEFGRTLTPKEAFRLLSHKFHGKGPGKMKEEKRMKQYQEELKLKQMKN 735 Query 153 DCLP--TLKALKKVQEGESSAHLVLT 176 P +++ +++ Q + +LVL+ Sbjct 736 SDTPSQSVQRMREAQAQLKTPYLVLS 761 > Hs10863889 Length=800 Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%) Query 98 EVNIDYRDAFGNVMTAKDAFRRISWHFHGKFPSLRKQEKKIKKLELERRLQENIMDCLP- 156 +V I+Y D G +T K+AFR++S FHGK K E+++KKL+ E L++ P Sbjct 707 DVKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPL 766 Query 157 -TLKALKKVQEGESSAHLVLT 176 T+ L++ Q+ + + ++VL+ Sbjct 767 GTVALLQEKQKAQKTPYIVLS 787 > At3g14700 Length=204 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%) Query 15 SSKKQREETEEGEVVENVPKEDEEEEEEEGDSEPEFMAEQPIGDSVSGALQYLQSKDFFS 74 SS+++RE + E + V K + GD M E +G +SGAL L+ + F Sbjct 52 SSERRREVCSKAEDI--VDKAIDNHSRVRGDG---IMREADVGTGLSGALNRLREQGTF- 105 Query 75 LDKIRRRRGHHLEQPLHNADND------KEVNIDYRDAFGNVMTAKDAFRRISWHFHGKF 128 + G + +N ++D K++ I + +G +MT K+A+R + FHGK Sbjct 106 -----KEEGKVVGVKDNNHEDDRFKDRFKDIQIQRVNKWGRIMTEKEAYRSLCHGFHGKG 160 Query 129 PS 130 P Sbjct 161 PG 162 > YOR308c Length=587 Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 0/55 (0%) Query 96 DKEVNIDYRDAFGNVMTAKDAFRRISWHFHGKFPSLRKQEKKIKKLELERRLQEN 150 D ++ + YRD GN +T K+A++++S FHG + +K+ K ++E + EN Sbjct 524 DPDIKLVYRDEKGNRLTTKEAYKKLSQKFHGTKSNKKKRAKMKSRIEARKNTPEN 578 > CE01257 Length=362 Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust. Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 6/119 (5%) Query 38 EEEEEEGDSEPEFMAEQPIGDSVSGALQYLQSKDFFSLDKIRRRRGHHLEQPLHNADNDK 97 E E E G+SEPE + V A+Q+ + K + I ++ G H K Sbjct 100 EIENEAGNSEPEQLLNTARCKCVDLAIQWTKQK---ATTPIEKKYG---SAAFHTVLAKK 153 Query 98 EVNIDYRDAFGNVMTAKDAFRRISWHFHGKFPSLRKQEKKIKKLELERRLQENIMDCLP 156 V +D+ + N D F+ + H ++ S +++E + + + +E Q +D P Sbjct 154 LVAVDHVELAKNHFLLSDDFKSFANFLHQEYESFKQKESEPEVIIVEAVFQSLCLDRFP 212 > SPAC167.03c Length=649 Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query 98 EVNIDYRDAFGNVMTAKDAFRRISWH-FHGKFPSLRKQEKKIKKL 141 +V+I Y D FG + K+A++ + H FHGK K EK+++++ Sbjct 593 QVDIKYVDEFGVELGPKEAYKYLLSHQFHGKGSGKAKTEKRLRRI 637 Lambda K H 0.308 0.127 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2707167450 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40