bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_3113_orf2 Length=157 Score E Sequences producing significant alignments: (Bits) Value SPBC16G5.01 55.1 6e-08 7294333 47.0 2e-05 At1g64520 46.2 2e-05 Hs4506233 45.4 4e-05 7294091 33.5 0.19 > SPBC16G5.01 Length=159 Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query 27 AFQRHMNMLLPYYCDLAHVLPPSPMQQELQCLQLLHYLAGDCIAELHTAYDRLPEE--IQ 84 +F R+ + ++P+Y D L PS + L LL+ L+ + IAE HTA + +P++ + Sbjct 69 SFARYASQVIPFYHD---SLVPSSRMGLVTGLNLLYLLSENRIAEFHTALESVPDKSLFE 125 Query 85 RSPYIVTVMRLEQQLMSGDYEAV 107 R PY+ V+ LEQ +M G ++ V Sbjct 126 RDPYVEWVISLEQNVMEGAFDKV 148 > 7294333 Length=262 Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query 26 AAFQRHMNMLLPYYCDLAHVLPPSPMQQELQCLQLLHYLAGDCIAELHTAYDRLPEE-IQ 84 AAF+R+M L YY D L S + L LL+ LA + +A+ H +RLP + Sbjct 74 AAFERYMAQLNTYYYDYDKYLESSKHMYKFMGLNLLYMLATNRLADFHIELERLPTALLL 133 Query 85 RSPYIVTVMRLEQQLMSGDYEAVMKQQQQ 113 +I V+ LE M G Y +++ ++ Sbjct 134 HDSFIQPVLALENYYMEGRYNKILQAKKS 162 > At1g64520 Length=267 Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 21/137 (15%) Query 20 MMTETAAAFQRHMNMLLPYYCDLAHVLPPSPMQQELQCLQLLHYLAGDCIAELHTAYDRL 79 + TE AF+R L PYY D + +P SP + + L LL L + IAE HT + L Sbjct 73 VKTEDQDAFERDFFQLKPYYVDARNRIPQSPQENLILGLNLLRLLVQNRIAEFHTELELL 132 Query 80 PEEIQRSPYIVTVMRLEQQLMSGDYEAVMKQQQQQLQQQQQQQQQQQQQQQQVCLPRSAA 139 P I + LEQ M G Y V+ +Q P + Sbjct 133 SSATLEDPCIKHAVELEQSFMEGAYNRVLSARQTA--------------------PDATY 172 Query 140 V-FLSQLTKTVQQQIAA 155 V F+ L KT++ +IA Sbjct 173 VYFMDLLAKTIRDEIAG 189 > Hs4506233 Length=257 Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Query 27 AFQRHMNMLLPYYCDLAHVLPPSPMQQELQCLQLLHYLAGDCIAELHTAYDRLP-EEIQR 85 +F+R+M L YY D LP S +L L LL L+ + +AE HT +RLP ++IQ Sbjct 70 SFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQT 129 Query 86 SPYIVTVMRLEQQLMSGDYEAVM 108 + YI + LEQ LM G Y V Sbjct 130 NVYIKHPVSLEQYLMEGSYNKVF 152 > 7294091 Length=264 Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Query 20 MMTETAAAFQRHMNMLLPYYCDLAHVLPPSPMQQELQCLQLLHYLAGDCIAELHTAYDRL 79 ++++ AF+R+M L YY D A ++ S + +L L LL+ L+G+ +++ HT + L Sbjct 71 VLSKDLLAFERYMAQLKCYYYDYAKIIGESESKYKLLGLNLLYLLSGNRVSDFHTELELL 130 Query 80 P-EEIQRSPYIVTVMRLEQQLMSGDYEAVM 108 + IQ + +I ++ LEQ +M G Y + Sbjct 131 SVDVIQHNQFIRPILALEQYIMEGRYNKIF 160 Lambda K H 0.320 0.128 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2106641548 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40